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Comparative Analysis of Microsatellite DNA Polymorphism in Gold Grass Carp and Four Grass Carp Populations from China

Comparative Analysis of Microsatellite DNA Polymorphism in Gold Grass Carp and Four Grass Carp Populations from China
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摘要 [ Objectives ] To analyze the genetic structure and genetic diversity of gold grass carp population. [ Methods ] A total of 15 microsatellite markers were used to examine gold grass carp population and four grass carp populations[ Yuanjiang (YJ), Ningxiang (NX) , Honghu (HH) and Xijiang (XJ) ] from the Yangtze River and the Pearl River of China. [ Results] All the 15 microsatellite loei were highly polymorphic, with polymorphism information content (PIC) of 0.763 -0.939. The expected heterozygosity (HE ) of gold grass carp population was 0. 662, lower than those of the four Chinese grass carp populations (HE = 0.85 - 0. 885 ). The genetic differentiation index ( FST ) between gold grass carp population and YJ, NX, HH, XJ populations were 0. 157 2, 0. 129 5, 0. 147 5 and 0. 114 4, respectively. This suggests that gold grass carp population is highly differentiated from YJ grass carp population (0.15 〈 FST 〈0.25), while moderately differentiated from other three grass carp populations (0.05 〈 FST 〈 0.15 ). Gold grass carp population had the closest genetic relationship with XJ population (DA = 0.476 3), and it showed the farthest genetic relationship with YJ grass carp population (DA = 0. 810 7). The NJ phylogenetic tree based on genetic distance indicated that four Chinese grass carp populations clustered together as one branch, while gold grass carp population as another. [ Conclusions] Genetic di- versity of gold grass carp population is lower than that of Chinese grass carp population, with relative distant genetic relationship. [ Objectives ] To analyze the genetic structure and genetic diversity of gold grass carp population. [ Methods ] A total of 15 microsatellite markers were used to examine gold grass carp population and four grass carp populations[ Yuanjiang (YJ), Ningxiang (NX) , Honghu (HH) and Xijiang (XJ) ] from the Yangtze River and the Pearl River of China. [ Results] All the 15 microsatellite loei were highly polymorphic, with polymorphism information content (PIC) of 0.763 -0.939. The expected heterozygosity (HE ) of gold grass carp population was 0. 662, lower than those of the four Chinese grass carp populations (HE = 0.85 - 0. 885 ). The genetic differentiation index ( FST ) between gold grass carp population and YJ, NX, HH, XJ populations were 0. 157 2, 0. 129 5, 0. 147 5 and 0. 114 4, respectively. This suggests that gold grass carp population is highly differentiated from YJ grass carp population (0.15 〈 FST 〈0.25), while moderately differentiated from other three grass carp populations (0.05 〈 FST 〈 0.15 ). Gold grass carp population had the closest genetic relationship with XJ population (DA = 0.476 3), and it showed the farthest genetic relationship with YJ grass carp population (DA = 0. 810 7). The NJ phylogenetic tree based on genetic distance indicated that four Chinese grass carp populations clustered together as one branch, while gold grass carp population as another. [ Conclusions] Genetic di- versity of gold grass carp population is lower than that of Chinese grass carp population, with relative distant genetic relationship.
出处 《Animal Husbandry and Feed Science》 CAS 2017年第6期379-383,397,共6页 动物与饲料科学(英文版)
基金 Supported by National Freshwater Fish Industry Technology System Project(CARS-46-03) Special Fund for Guangdong Provincial Marine Fishery Science and Technology and Industrial Development(A201401A03) Natural Science Foundation of Guangdong Province(2016A030313148)
关键词 Ctenopharyngodon idellus Genetic structure MICROSATELLITE Genetic distance HETEROZYGOSITY Ctenopharyngodon idellus Genetic structure Microsatellite Genetic distance Heterozygosity
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