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Application of PCR-DGGE in Research of Bacterial Diversity in Drinking Water 被引量:7

Application of PCR-DGGE in Research of Bacterial Diversity in Drinking Water
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摘要 Objective To analyze the structure of bacteria in drinking water by molecular biological techniques, Methods DNA of bacteria in drinking water was directly extracted without culture. 16S ribosomal DNA fragments, including V-6, -7, and -8 regions, were amplified with universal primers (EUBf933CJC and EUBr1387) and analyzed by DGGE. Results DGGE indicated that amplification products could be separated, The results showed that DGGE could be used in the separation of different microbial 16SrRNA genes extracted from drinkng water. Though there were special bacteria in different water samples, the predominant bacteria were essentially the same. Three sequences of the reclaimed specific bands were obtained, and phylogenetic tree of these bands was made. Conclusion Bacterial diversity in drinking water is identified by molecular biological techniques. Objective To analyze the structure of bacteria in drinking water by molecular biological techniques, Methods DNA of bacteria in drinking water was directly extracted without culture. 16S ribosomal DNA fragments, including V-6, -7, and -8 regions, were amplified with universal primers (EUBf933CJC and EUBr1387) and analyzed by DGGE. Results DGGE indicated that amplification products could be separated, The results showed that DGGE could be used in the separation of different microbial 16SrRNA genes extracted from drinkng water. Though there were special bacteria in different water samples, the predominant bacteria were essentially the same. Three sequences of the reclaimed specific bands were obtained, and phylogenetic tree of these bands was made. Conclusion Bacterial diversity in drinking water is identified by molecular biological techniques.
出处 《Biomedical and Environmental Sciences》 SCIE CAS CSCD 2006年第5期371-374,共4页 生物医学与环境科学(英文版)
基金 This research was supported by grants from Chinese National Science Foundation (50478086). The 10th Five-year Key Programs for Science and Technology Development of China (2002AA601120).
关键词 Drinking water Denaturing gradient gel electrophoresis (DGGE) 16S ribosome RNA Microbial diversity Drinking water Denaturing gradient gel electrophoresis (DGGE) 16S ribosome RNA Microbial diversity
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  • 1布坎南 R E 吉本斯 N E 中国科学院微生物研究所译.伯杰细菌鉴定手册:第8版[M].北京: 科学出版社,1984..
  • 21,Tong YY, Che FX, Xu XZet al. Population study of atmospheric bacteria at the Fengtai district of Beijing on tworepresentative days. Aerobiologia, 1993, 9: 69
  • 32,Amann RI, Ludwig W, Schleifer K.H. Phylogenetic identification and in situ detectionof individual microbial cells without cultivation. Micro Rew, 1995, 59: 143
  • 43,中国科学院微生物所细菌分类组.普通细菌鉴定方法.北京:科学出版社.1978.
  • 55,Bollet C, Gevaudan MJ, de Lamballerie XA et al. A simple method for the isolation ofchromosomal DNA from Gram positive or acid.fast bacteria. Nucleic Acids Res, 1991, 19:1955
  • 66,Greisen K, Loeffelholz M, Puroth A et al. PCR primers and probes for the 16S rRNA geneof most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid. JClin Microbiol, 1994, 32: 335
  • 77,Altschul, Stephen F., Thomas L. Madden, et al. Gapped BLAST and PSI.BLAST: a newgeneration of protein database search programs. Nucleic Acids Res, 1997, 25: 3389
  • 89,Stackebrandt E, Koch C, Gvozdiak O et al. Taxonomic dissection of the genusMicrococcus: Kocuria gen. nov., Nesterenkonia gen. nov., Kytococcus gen. nov., dermacoccusgen. nov., and Micrococcus Cohn 1872 gen. emend. Int J Syst Bacteriol, 1995, 45:682
  • 910,Koch C, Schumann P, Stackebrandt E. Reclassification of Micrococcus agilis (Ali.Cohen1889) to the genus Arthrobacter as Arthrobacter agilis comb. nov. and emendation of thegenus Arthrobacter. Int J Syst Bacteriol, 1995, 45:837 (1999-12-07 收稿)
  • 10陈文新.细菌系统发育[J].微生物学报,1998,38(3):240-243. 被引量:54

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