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Development of a SCAR marker for male gametophyte of Gracilariopsis lemaneiformis based on AFLP technique 被引量:1

Development of a SCAR marker for male gametophyte of Gracilariopsis lemaneiformis based on AFLP technique
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摘要 The red alga Gracilariopsis lemaneiformis(Bory) is an economically valuable macroalgae. As a means to identify the sex of immature Gracilariopsis lemaneiformis, the amplifi ed fragment length polymorphism(AFLP) technique was used to search for possible sex- or phase-related markers in male gametophytes, female gametophytes, and tetrasporophytes, respectively. Seven AFLP selective amplifi cation primers were used in this study. The primer combination E-TG/M-CCA detected a specifi c band linked to male gametophytes. The DNA fragment was recovered and a 402-bp fragment was sequenced. However, no DNA sequence match was found in public databases. Sequence characterized amplifi ed region(SCAR) primers were designed from the sequence to test the repeatability of the relationship to the sex, using 69 male gametophytes, 139 female gametophytes, and 47 tetrasporophytes. The test results demonstrate a good linkage and repeatability of the SCAR marker to sex. The SCAR primers developed in this study could reduce the time required for sex identifi cation of Gracilariopsis lemaneiformis by four to six months. This can reduce both the time investment and number of specimens required in breeding experiments. The red alga Gracilariopsis lemaneiformis (Bory) is an economically valuable macroalgae. As a means to identify the sex of immature Gracilariopsis lemaneiformis, the amplified fragment length polymorphism (AFLP) technique was used to search for possible sex- or phase-related markers in male gametophytes, female gametophytes, and tetrasporophytes, respectively. Seven AFLP selective amplification primers were used in this study. The primer combination E-TG/M-CCA detected a specific band linked to male gametophytes. The DNA fragment was recovered and a 402-bp fragment was sequenced. However, no DNA sequence match was found in public databases. Sequence characterized amplified region (SCAR) primers were designed from the sequence to test the repeatability of the relationship to the sex, using 69 male gametophytes, 139 female gametophytes, and 47 tetrasporophytes. The test results demonstrate a good linkage and repeatability of the SCAR marker to sex. The SCAR primers developed in this study could reduce the time required for sex identification of Gracilariopsis lemaneiformis by four to six months. This can reduce both the time investment and number of specimens required in breeding experiments.
出处 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2014年第3期522-526,共5页 中国海洋湖沼学报(英文版)
基金 Supported by the"Twelfth Five-Year-Plan"of National Science and Technology for the Rural Development in China(No.2012AA10A411) the Public Welfare Project of the Ministry of Agriculture of China(No.200903030)
关键词 Gracilariopsis lemaneiformis amplified fragment length polymorphism (AFLP) male gametophyte sequence characterized amplified region (SCAR) marker AFLP技术 SCAR标记 雄配子体 龙须菜 片段长度多态性 DNA片段 发育 序列匹配
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  • 1SUN Xue, YANG Guanpin, MAO Yunxiang, ZHANG Xuecheng, SUI Zhenghong and QIN Song(1. College of Marine Life Sciences, Ocean University of Qingdao, Qingdao 266003, China,2. Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China).Analysis of expressed sequence tags of a marine red alga,Gracilaria lemaneiformis[J].Progress in Natural Science:Materials International,2002,12(7):518-523. 被引量:4
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