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‘阳光玫瑰’葡萄病毒小RNA测序鉴定及RT-PCR检测 被引量:14

Small RNA sequencing and RT-PCR detection of viruses infecting ‘Shine Muscat’ grapevines
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摘要 ‘阳光玫瑰’是我国从日本引进的葡萄优良品种。为了明确我国‘阳光玫瑰’葡萄病毒病的病原,本研究采用小RNA测序技术对2株显症和无症状的‘阳光玫瑰’葡萄样品进行病毒鉴定结果显示:显症样品中测定到8种病毒,其中包含葡萄蚕豆萎蔫病毒(Grapevine fabavirus,GFabV)和灰比诺葡萄病毒(Grapevine Pinot gris virus,GPGV);无症状样品中测定到3种葡萄病毒。对46个‘阳光玫瑰’样品进行14种葡萄病毒的RT-PCR检测,结果表明:‘阳光玫瑰’葡萄带毒率较高,病毒复合侵染情况普遍;显症样品中,GFabV检出率为88.2%,GPGV和葡萄浆果内坏死病毒(Grapevine berry inner necrosis virus,GINV)检出率为64.7%和29.4%,均明显高于无症状样品(13.8%和10.3%)。本研究旨在探明‘阳光玫瑰’葡萄携带病毒的种类和侵染状况,为其病毒病防控及病毒脱除奠定基础。 ‘Shine-Muscat’grapevine is a new introduced cultivar in China.To identify the related viruses with the‘Shine-Muscat’grapevine virus disease,we adopted small RNA sequencing to detect the viruses in the asymptomatic and symptomatic‘Shine-Muscat’grapevine samples.Results showed that the presence of eight viruses in the symptomatic‘Shine-Muscat’grapevine including Grapevine fabavirus(GFabV)and Grapevine Pinot gris virus(GPGV),and only three viruses in the asymptomatic grapevine.Forty-six‘Shine-Muscat’grapevine samples were tested for 14 viruses by RT-PCR,and the results showed that these samples had high virus detection rate,and mixed-infection of multiple viruses was common.Grapevine fabavirus(GFabV)was only found in the symptomatic samples with a detection rate of 88.2%.There was a higher incidence of GPGV and Grapevine berry inner necrosis virus(GINV)(64.7%and 29.4%)in symptomatic samples than that in asymptomatic samples(13.8%and 10.3%).This study identified the species and infection status of viruses in‘Shine-Muscat’grapevines,and provides the theoretical basis for the control of‘Shine-Muscat’grapevine virus disease by sanitary treatments for propagation materials.
作者 范旭东 董雅凤 张尊平 张梦妍 任芳 胡国君 FAN Xu-dong;DONG Ya-feng;ZHANG Zun-ping;ZHANG Meng-yan;REN Fang;HU Guo-jun(National Center for Eliminating Viruses from Deciduous Fruit Trees,Research Institute of Pomology,Chinese Academy of Agriculture Sciences,Xingcheng 125100,China)
出处 《植物病理学报》 CAS CSCD 北大核心 2019年第6期749-755,共7页 Acta Phytopathologica Sinica
基金 国家重点研发计划项目(2018YFD0201301) 国家葡萄产业技术体系建设项目(CARS-29-bc-1) 中央级公益性科研院所基本科研业务费专项.
关键词 阳光玫瑰 小RNA测序 葡萄病毒 RT-PCR Shine-Muscat small RNA sequencing grapevine virus RT-PCR
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  • 1董雅凤,张尊平,刘凤之,王宝亮,张少瑜.沙地葡萄茎痘相关病毒RT-PCR检测[J].果树学报,2007,24(5):705-708. 被引量:7
  • 2Martelli G P. Rugose wood complex. In: graft-transmissible diseases of grapevines: handbook for detection and diagnosis [M]. Rome: Food and Agriculture Organization of the United Nations, 1993. 45-54.
  • 3Rwahnih M A, Sudarshana M R, Uyemoto J K, et al. Complete genome sequence of a novel vitivirus isolated from grapevine [J]. Journal of virology, 2012, 86(17): 9545.
  • 4Alabi O J, Poojari S, Sarver K, et al. Complete genome sequence analysis of an American isolate of Grapevine virus E [J]. Virus Genes, 2013,46(3):563-566.
  • 5Nakaune R, Toda S, Mochizuki M, et al. Identification and characterization of a new vitivirus from grapevine [J]. Archives of Virology, 2008, 153 (10): 1827-1832.
  • 6Coetzee B, Maree H J, Stephan D, et al. The first complete nucleotide sequence of a Grapevine virus E variant [J]. Archives of Virology, 2010, 155(8): 1357-1360.
  • 7Foissac X, Svanella-Dumas L, Dulucq M J, et al. Polyvalent detection of fruit tree tricho-, capillo-and foveaviruses by nested RT-PCR using degenerate and inosine containing primers (DOP RT-PCR) [J]. Acta Horticulturae, 2001, 550: 37-44.
  • 8MacKenzie D J, McLean M A, Mukerji S, et al. Improved RNA extraction from woody plants for the detection of viral pathogens by reverse transcription-polymerase chain reaction [J]. Plant Disease, 1997, 81(2):222-226.
  • 9Coetzee B, Freeborough M J, Maree H J, et al. Deep sequencing analysis of viruses infecting grapevines: virome of a vineyard [J]. Virology, 2012, 400(2): 157-163.
  • 10Y. Yu,Z. Zhao,D. Jiang,Z. Wu,S. Li.A one‐step multiplex RT ‐ PCR assay for simultaneous detection of four viruses that infect peach[J].Lett Appl Microbiol.2013(4)

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