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New combination test for hepatitis C virus genotype and viral load determination using Amplicor GT HCV MONITOR test v2.0 被引量:3

New combination test for hepatitis C virus genotype and viral load determination using Amplicor GT HCV MONITOR test v2.0
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摘要 AIM: To develop a new sensitive and inexpensive hepatitis C virus (HCV) combination test (HCV Guideline test) that enables the determination of HCV genotypes 1, 2 and 3,and simultaneous determination of HCV viral load using commercial Amplicor GT HCV MONITOR test v2.0 (microwell version).METHODS: The HCV Guideline test used the PCR product generated in commercial Amplicor GT HCV Monitor test v2.0 for viral load measurement using microwell plate version of Amplicor HCV Monitor and also captured on separate plates containing capture probes and competitive oligonucleotide probes specific for HCV genotypes 1, 2 and 3, The HCV genotype was subsequently determined using the biotin-labeled PCR product and five biotin-labeled HCV-specific probes.RESULTS: The sensitivity of the HCV Guideline test was 0.5 KIU/mL. Specificity of the HCV Guideline test was confirmed by direct sequencing of HCV core region and molecular evolutionary analyses based on a panel of 31 samples. The comparison of the HCV Guideline test and an in-house HCV core genotyping assay using 252 samples from chronic hepatitis C patients indicated concordant results for 97.2% of samples (59.5% genotype 1, 33.7% genotype 2, 6.0% genotype 3, and 0.8% mixed genotypes).Similarly, the HCV Guideline test showed concordance with a serological test, and the serological test failed to assign any serotype in 12.7% of the samples, indicating a better sensitivity of the HCV Guideline test.CONCLUSION: Clinically, both viral load and genotypes (1, 2 and 3) have been found to be major predictors of antiviral therapy outcome regarding chronic hepatitis C based on guidelines and they are, in normal circumstances,performed as separate stand-alone assays. The HCV Guideline test is a useful method for screening large cohorts in a routine clinical setting for determining the treatment regimen and for predicting the outcome of antiviral therapy of chronic hepatitis C. AIM: To develop a new sensitive and inexpensive hepatitis C virus (HCV) combination test (HCV Guideline test) that enables the determination of HCV genotypes 1, 2 and 3, and simultaneous determination of HCV viral load using commercial Amplicor GT HOV MONITOR test v2.0 (microwell version). METHODS: The HCV Guideline test used the PCR product generated in commercial Amplicor GT HCV Monitor test v2.0 for viral load measurement using microwell plate version of Amplicor HCV Monitor and also captured on separate plates containing capture probes and competitive oligonucleotide probes specific for HCV genotypes 1, 2 and 3, The HCV genotype was subsequently determined using the biotin-labeled PCR product and five biotin-labeled HCV-specific probes. RESULTS: The sensitivity of the HCV Guideline test was 0.5 KIU/mL. Specificity of the HCV Guideline test was confirmed by direct sequencing of HCV core region and molecular evolutionary analyses based on a panel of 31 samples. The comparison of the HCV Guideline test and an in-house HCV core genotyping assay using 252 samples from chronic hepatitis C patients indicated concordant results for 97.2% of samples (59.5% genotype 1, 33.7% genotype 2, 6.0% genotype 3, and 0.8% mixed genotypes). Similarly, the HCV Guideline test showed concordance with a serological test, and the serological test failed to assign any serotype in 12.7% of the samples, indicating a better sensitivity of the HCV Guideline test. CONCLUSION: Clinically, both viral load and genotypes (1, 2 and 3) have been found to be major predictors of antiviral therapy outcome regarding chronic hepatitis C based on guidelines and they are, in normal circumstances, performed as separate stand-alone assays. The HCV Guideline test is a useful method for screening large cohorts in a routine clinical setting for determining the treatment regimen and for predicting the outcome of antiviral therapy of chronic hepatitis C.
出处 《World Journal of Gastroenterology》 SCIE CAS CSCD 2005年第4期469-475,共7页 世界胃肠病学杂志(英文版)
关键词 新化合物试验 丙肝病毒 基因型 病毒测定 GT HCV HCC Hepatitis CVirus HCV Guideline test Viral Load Genotype
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  • 1Alter HJ, Purcell RH, Shih JW, Melpolder JC, Houghton M,Choo QL, Kuo G. Detection of antibody to hepatitis C virus in prospectively followed transfusion recipients with acuteand chronic non-A non-B hepatitis. N Engl J Med 1989: 321:1494-1500.
  • 2Wasley A, Alter MJ. Epidemiology of hepatitis C: geographic differences and temporal trends. Semin Liver Dis 2000; 20: 1-16.
  • 3Tanaka Y, Hanada K, Mizokami M, Yeo AE, Shih JW, Gojobori T, Alter HJ. Inaugural Article: A comparison of the molecular clock of hepatitis C virus in the United States and Japan predicts that hepatocellular carcinoma incidence in the United States will increase over the next two decades. Proc Natl Acad Sci U S A 2002; 99:15584-15589.
  • 4Robertson B, Myers G, Howard C, Brettin T, Bukh J, Gaschen B, Gojobori T, Maertens G, Mizokami M, Nainan O, Netesov S,Nishioka K, Shin i T, Simmonds P, Smith D, Stuyver L, Weiner A. Classification, nomenclature, and database development for hepatitis C virus (HCV) and related viruses: proposals for standardization. International Committee on Virus Taxonomy.Arch Virol 1998; 143:2493-2503.
  • 5Orito E, Mizokami M, Nakano T, Terashima H, Nojiri O,Sakakibara K, Mizuno M, Ogino M, Nakamura M, Matsumoto Y. Serum hepatitis C virus RNA level as a predictor of subsequent response to interferon-alpha therapy in Japanese patients with chronic hepatitis C. J Med Virol 1994; 44:410-414.
  • 6Yoshioka K, Kakumu S, Wakita T, Ishikawa T, Itoh Y,Takayanagi M, Higashi Y, Shibata M, Morishima T. Detection of hepatitis C virus by polymerase chain reaction and response to interferon-alpha therapy: relationship to genotypes of hepatitis C virus. Hepatology 1992; 16:293-299.
  • 7Shiratori Y, Kato N, Yokosuka O, Imazeki F, Hashimoto E,Hayashi N, Nakamura A, Asada M, Kuroda H, Tanaka N,Arakawa Y, Omata M. Predictors of the efficacy of interferon therapy in chronic hepatitis C virus infection. Tokyo-Chiba Hepatitis Research Group. Gastroenterology 1997: 113: 558-566.
  • 8Di Bisceglie AM, Hoofnagle JH. Optimaltherapv of hepatitis C. Hepatology 2002; 36(5 Suppl 1): S121-127.
  • 9Berg T, Sarrazin C, Herrmann E, Hinrichsen H, Gerlach T,Zachoval R, Wiedenmann B, Hopf U, Zeuzem S. Prediction of treatment outcome in patients with chronic hepatitis C: significance of baseline parameters and viral dynamics during therapy.Hepatology 2003; 37:600-609.
  • 10Salomon JA, Weinstein MC, Hammitt JK, Goldie SJ. Costeffectiveness of treatment for chronic hepatitis C infection in an evolving patient population, JAMA 2003: 9:228-337.

同被引文献14

  • 1刘玉兰,杜绍材,陶其敏.Establishment of labeling primer reverse transcription in situ polymerase chain reaction and detection of hepatitis C virus in liver tissues[J].Chinese Medical Journal,2000(2):7-10. 被引量:2
  • 2王露楠,吴健民,李金明,邓巍,王忠芳,申子瑜,陈文祥.丙型肝炎病毒核酸检测的国家标准物质的研制[J].中华检验医学杂志,2006,29(4):354-357. 被引量:40
  • 3K. Sandres,M. Dubois,C. Pasquier,J. Puel,J. Izopet.Determination of HCV Genotype Using Two Antibody Assays and Genome Typing[J].European Journal of Clinical Microbiology & Infectious Diseases.2001(9)
  • 4Elsawy EM,Sobh MA,El-Chenawi FA,Hassan IM,Shehab El-Din AB,Ghoneim MA.Serotyping of hepatitis C virus in hemodialysis patients:comparison with a standardized genotyping assay[].Diagnostic Microbiology and Infectious Disease.2005
  • 5Choo,QL,RichmanKH,HanJH,BergerK,LeeC,DongCetal.GeneticorganizationanddiversityofthehepatitisCvirus[].Proceedings of the National Academy of Sciences of the United States of America.1991
  • 6Kolykhalov A A,Agapov E V,Rice C M.Specificity of the hepatitis C virus NS3 serine protease: effects of substitutions at the 3/4A, 4A/4B, 4B/5A and 5A/5B cleavage sites on polyprotein processing[].Journal of Virology.1994
  • 7Forns X,Costa J.HCV virological assessment[].J Hepatol.
  • 8Simmonds,P,Rose,KA,Graham,S,Chan,SW,McOmish,F,Dow,BC,Follett,EAC,Yap,PL,Marsden,H.Mapping of serotype-specific, immunodominant epitopes in the NS-4 region of hepatitis C virus (HCV): use of type-specific peptides to serologically differentiate infections with HCV type 1, 2 and 3[].Journal of Clinical Microbiology.1993
  • 9Rodriguez-Lopez,M,Rieze-Boj,JI,Ruiz,M,Berasain,C,Civeira,MP,Prieto,J,Borras-Cuesta,F.Immunogenicity of variable regions of hepatitis C virus proteins: selection and modification of peptide epitopes to assess hepatitisa C virus genotypes by ELISA[].Journal of General Virology.1999
  • 10Chang,J.C.,Ruedinger,B.,Cong,M.,Lambert,S.,Lopareva,E.,Purdy,M.,Holloway,B.P.,Jue,D.L.,Ofenloch,B.,Fields,H.A.,Khudyakov,Y.E.Artificial NS4 mosaic antigen of hepatitis C virus[].Journal of Medical Virology.1999

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