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利用EST数据库资源克隆家蚕Bombyx mori6-磷酸葡萄糖酸脱氢酶基因 被引量:4

Cloning 6-phosphogluconate Dehydrogenase(6PGDH)of the Silkworm Bombyx mori by Selecting EST Database
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摘要 以果蝇6-磷酸葡萄糖酸脱氢酶(6-phosphogluconatedehydrogenase,6PGDH)基因cDNA序列为信息探针,对家蚕EST数据进行同源检索筛选,克隆到了家蚕6-磷酸葡萄糖酸脱氢酶基因的cD鄄NA序列,该基因全长2011bp。经RT-PCR克隆、序列分析验证,结果表明与电子克隆序列完全一致;该基因具有完整的开放阅读框(ORF),编码蛋白为483个氨基酸;通过与人、果蝇、家鼠、摇蚊、线虫的6PGDH蛋白序列比较,发现该基因具有高度的保守性。 A novel silkworm(Bombyx mori) 6-phosphogluconate dehydrogenase (6PGDH) gene was cloned by blasting its EST database with the fruit fly homologous 6PGDH gene cDNA sequence information as a querying probe. It was also verified by RT-PCR. The full-length 6PGDH of 2011bp contains a complete open reading fragment (ORF: 117-1566) and encodes 248 Aa protein, which was very conservative in Homo sapiens, Drosophila melanogaster, Anopheles gambiae, Mus musculus, Caenorhabditis elegans.
出处 《蚕桑通报》 2005年第1期14-19,共6页 Bulletin of Sericulture
基金 国家自然科学No:30371087。
关键词 EST数据库 RT—PCR 6-磷酸葡萄糖酸脱氢酶基因 家蚕 ESTdatabase RT-PCR 6-phosphogluconate dehydrogenase Bombyx mori
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  • 1张德礼,孙晓静,凌伦奖,陈润生,马大龙.人类SR蛋白超家族新成员——SFRS12(SRrp508)的基因克隆和特性分析[J].Acta Genetica Sinica,2002,29(5):377-383. 被引量:43
  • 2Tsui,S.K., Chan,J.Y., Waye,M.M., Fung, K.P. and Lee,C.Y. Identification of a cDNA encoding 6-phosphogluconate dehydrogenase from a human heart cDNA library [J].Biochem.Genet,1996,34(9-10):367-373.
  • 3Strausberg R L Feingold E A, Grouse L H and etc. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences[J]. Proc. Natl. Acad. USA, 2002(26):16899-16903.
  • 4Zhang C, Yu Y, Zhang S, Liu M, Xing G, Wei H, Bi J, Liu X, Zhou G, Dong C, Hu Z, Zhang Y, Luo L, Wu C, Zhao S, He F. Characterization, chromosomal assignment, and tissue expression of a novel human gene belonging to the ARF. GAP family[J]. Genomics,2000,63(3):400-408.
  • 5Wei M H, Karavanova I, Ivanov S V, Popescu N C, Keck C L, Pack S, Eisen J A, Lerman M I. In silico-initiated cloning and molecular characterization of a novel human member of the L1 gene family of neural cell adhesion molacules[J].Human Genetics,1998,103(3):355-364.
  • 6Hosoi T, Koguchi Y, Sugikawa E, Chikada A, Ogawa K,Tsuda N, Suto N, Tsunoda S, Taniguchi T, Ohnuki T. Identification of a novel human eicosanoid receptor coupled to G(i/o) [J].The Journal of Biological Chemistry,2002,277(35):31459-31465.
  • 7West A B, Lockhart P J, O'farell C, Farrer M J. Identification of a novel gene linked to parkin via a bidirectional promoter[J]. Journal of Molecular Biology,2003,326(1):11-19.
  • 8Prigent C, Gill R, Trower M, Sanseau P. In silico cloning of a new protein kinase, Aik2, related to Drosophila aurora using the new tool[J].EST Blast. In Silico Biology, 1999,1(2):123-128.
  • 9黄骥,王建飞,张红生,曹雅君,林长发,王东,杨金水.水稻葡萄糖-6-磷酸脱氢酶cDNA的电子克隆[J].Acta Genetica Sinica,2002,29(11):1012-1016. 被引量:35

二级参考文献34

  • 1Lander E S, Linton L M, Birren B et al. (International Human Genome Sequence Consortium) Initial sequencing and analysis of the human genome. Nature, 2001,409(6822):860~921.
  • 2Venter J C, Adams M D, Myers E W et al. The sequence of the human genome. Science, 2001,291(5507):1304-1351.
  • 3Wiemann S, Weil B, Wellenreuther R et al. Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs. Genome Research, 2001,11(3):422~435.
  • 4Blumberg H, Conklin D, Xu W F et al. Interleukin 20:Discovery, receptor identification, and role in epidermal function. Cell, 2001,104(1):9~19.
  • 5Huminiecki L, Bicknell R. In silico cloning of novel endothelial-specific genes. Genome Research, 2000, 10(11):1796~1806.
  • 6Schultz J et al. More than 1000 putative new human signalling proteins revealed by EST data mining. Nat. Genet., 2000,25(2):201~204.
  • 7Wheeler R B,Sharp J D, Schultz R A et al. In Silico Cloning: the identification of genes within the CLN6 critical region. AM. J. HUM. GENET., 2001,69(4):1573 Suppl.
  • 8Chen Y,Zhao Y H, Wu R. In silico cloning of mouse Muc5b gene and upregulation of its expression in mouse asthma model. AM. J. RESP. CRIT. CARE., 2001,164(6):1059~1066.
  • 9Hangen N,Arand M,Oesch F. Human genome analysis and xenobiotic metabolism: In silico cloning of a new human putative epoxide hydrolase. N-S Arch. Pharmacol., 2001,363(4):530 Suppl.
  • 10Choo K B, Chen H H, Cheng W T K et al. In silico mining of EST databases for novel pre-implantation embryo-specific zinc finger protein genes. Mo1. Reprod. Dev., 2001,59(3):249~255.

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