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Symmetric linear potential and imperfect Brownian ratchet in molecular motor function

Symmetric linear potential and imperfect Brownian ratchet in molecular motor function
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摘要 Biomolecular motors are tiny engines that transport materials at the microscopic level within biological cells. In recent years, Elston and Peskin et al have investigated the effect of the elastic properties of the tether that connects the motor to its cargo at the speed of the motor. In this paper we extend their work and present a tether in the form of symmetric linear potential. Our results show that when the driving mechanism is an imperfect Brownian ratchet, the average speed decreases as the stiffness of the tether increases in the limit of large motor diffusion coefficient, which is similar to the results of Elston and Peskin. However, a threshold for the stiffness of the tether connecting the motor to its cargo is found in our model. Only when the tether is stiffer than the threshold can the motor and its cargo function co-operatively, otherwise, the motor and its cargo depart from each other. This result is more realistic than that of the spring model of Elston and Peskin. Biomolecular motors are tiny engines that transport materials at the microscopic level within biological cells. In recent years, Elston and Peskin et al have investigated the effect of the elastic properties of the tether that connects the motor to its cargo at the speed of the motor. In this paper we extend their work and present a tether in the form of symmetric linear potential. Our results show that when the driving mechanism is an imperfect Brownian ratchet, the average speed decreases as the stiffness of the tether increases in the limit of large motor diffusion coefficient, which is similar to the results of Elston and Peskin. However, a threshold for the stiffness of the tether connecting the motor to its cargo is found in our model. Only when the tether is stiffer than the threshold can the motor and its cargo function co-operatively, otherwise, the motor and its cargo depart from each other. This result is more realistic than that of the spring model of Elston and Peskin.
出处 《Chinese Physics B》 SCIE EI CAS CSCD 2005年第9期1745-1754,共10页 中国物理B(英文版)
基金 Project supported by the National Natural Science Foundation of China (Grant No 39970217).
关键词 biomolecular motors Brownian ratchet protein flexibility symmetric linear potential biomolecular motors, Brownian ratchet, protein flexibility, symmetric linear potential
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参考文献12

  • 1Peskin C and Oster G 1995 Biophys. J. 68 202s.
  • 2Berg H and Kahn S 1983 A model for the flagellar rotary motor In: Suns H and Veeger C eds. Mobility and Recognition in Cell Biology (Berlin: de Gruyter) p485.
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  • 10Elston T, You D and Peskin C 2000 SIAM J. Appl. Math.61 776.

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