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用RAPD、ISSR和AFLP标记分析系谱关系明确的甘薯品种的亲缘关系 被引量:49

The Use of RAPD,ISSR and AFLP Markers for Analyzing Genetic Relationships among Sweetpotato Cultivars with Known Origin
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摘要 用RAPD、ISSR和AFLP标记对系谱关系明确的7个甘薯品种进行了亲缘关系分析。24个RAPD引物、14个ISSR引物和9对AFLP引物分别扩增出173、174和168条多态性带。3种分子标记在检测甘薯品种间遗传差异上相关程度高,其中RAPD与ISSR之间的相关系数最大为0.9328。用ISSR标记估计的品种间遗传距离为0.1286~1.0932,平均0.4883.大于其余2个标记的估计值。3种分子标记皆可揭示甘薯品种的亲缘关系,其中ISSR标记产生的聚类图与系谱图最吻合,认为ISSR标记更适于分析甘薯品种的亲缘关系。 Sweetpotato, Ipomoea batatas ( L. ) Lam., is an important crop as food, feed and industrial materials grown worldwide. Because of its many biological complexities such as natural heterozygote and cross-incompatibility, the analysis of the genetic relationships among cultivars is of interest not only for germplasm conservation but also for breeding purposes. Molecular techniques have been used broadly for germplasm characterization, variety identification, phylogenetic study and diversity analysis. There has been no report on analyzing genetic relationships among sweetpotato cultivars with known origin using molecular markers. In the present study, genetic relationships among seven sweetpotato cultivars with known origin were analysed using RAPD, ISSR and AFLP markers ( Fig. 1 ). Twenty-four RAPD primers, 14 ISSR primers and 9 AFLP primer pairs generated 173, 174 and 168 polymorphic bands, respectively (Fig.2, Table 1). For detecting the genetic differences among sweetpotato cultivars, the correlations among RAPD, ISSR and AFLP markers were significant with the highest correlation coefficient between RAPD and ISSR markers (0.9328). The ISSR-based genetic distances among the 7 sweetpotato cultivars, ranging from 0. 1286 to 1.0932 with an average of 0.4883, were higher than those calculated with the other two markers. The dendrograms based on RAPD, ISSR and AFLP markers could separately detect genetic relationships of the 7 sweetpotato cultivars and the ISSR-based dendrogram was the best in agreement with their known origin, suggesting that ISSR is the powerful marker for analyzing genetic relationships among sweetpotato cultivars (Fig. 3).
出处 《作物学报》 CAS CSCD 北大核心 2005年第10期1300-1304,共5页 Acta Agronomica Sinica
基金 国家杰出青年科学基金(30225028) 国家"863"计划(2003AA207140) 教育部教学科研奖励计划项目资助
关键词 甘薯 RAPD ISSR AFLP 亲缘关系 Sweetpotato RAPD ISSR AFLP Genetic relationship
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  • 1Arthur Q V, LaBonte D R. Variation in randomly amplified DNA markers and storage root yield in ‘Jewel’sweetpotato clones. J Amer Sco Hort Sci, 1995, 120: 734-740.
  • 2Arthur Q V, LaBonte D R. Genetic variation among sweetpotatoes propagated through nodal and adventitious sprouts. J Amer Sco Hort Sci, 1996, 121: 170-174.
  • 3Prakash C S, He G H. DNA marker-based study of genetic relatedness in United States sweetpotato cultivars. J Amer Sco Hort Sci, 1996, 121: 1 059-1 062.
  • 4He G H, Prakasha C S, Jarret R L. Analysis of genetic diversity in a sweetpotato (Ipomoea batatas) germplasm collection using DNA amplification fingerprinting. Genome, 1995, 38: 938-945.
  • 5Huang J C, Sun M. Genetic diversity and relationships of sweetpotato and its relatives in Ipomoea series Batatas (Convolvulaceae) as revealed by inter-simple sequence repeat (ISSR) and restriction analysis of chloroplast DNA. Theor Appl Genet, 2000, 100: 1 050-1 060.
  • 6Zhang D P, Cervantes J, Huamán Z, Carey E, Ghislain M. Assessment of genetic diversity of sweetpotato (Ipomoea batatas (L.) Lam.) cultivars from tropical America using AFLP. Genet Resour Crop Evol, 2000, 47: 659-665.
  • 7Zhang D P, Rossel G, Kriegner A, Hijimans R. AFLP assessment of diversity in sweetpotato from Latin America and the Pacific region: Its implications on the dispersal of the crop. Genet Resour Crop Evol, 2004, 51: 115-120.
  • 8Ukoskit K, Thompson P G, Watson C E Jr. Identifying a randomly amplified polymorphic DNA (RAPD) markers linked to a gene for root knot nematode resistance in sweetpotato. J Amer Sco Hort Sci, 1997, 122: 818-821.
  • 9Nei M, Li W H. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA, 1979, 76:5 269-5 273.
  • 10Barker J H A, Matthes M, Arnol G M, Edwards K J, Ahman I, larsson S, Karp A. Characterisation of genetic diversity in potential biomass willows (Salix spp.) by RAPD and AFLP analysis. Genome, 1999, 42: 173-184.

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