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A Hybrid Ant Colony Optimization for the Prediction of Protein Secondary Structure

A Hybrid Ant Colony Optimization for the Prediction of Protein Secondary Structure
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摘要 Based on the concept of ant colony optimization and the idea of population in genetic algorithm, a novel global optimization algorithm, called the hybrid ant colony optimization (HACO), is proposed in this paper to tackle continuous-space optimization problems. It was compared with other well-known stochastic methods in the optimization of the benchmark functions and was also used to solve the problem of selecting appropriate dilation efficiently by optimizing the wavelet power spectrum of the hydrophobic sequence of protein, which is the key step on using continuous wavelet transform (CWT) to predict a-helices and connecting peptides. Based on the concept of ant colony optimization and the idea of population in genetic algorithm, a novel global optimization algorithm, called the hybrid ant colony optimization (HACO), is proposed in this paper to tackle continuous-space optimization problems. It was compared with other well-known stochastic methods in the optimization of the benchmark functions and was also used to solve the problem of selecting appropriate dilation efficiently by optimizing the wavelet power spectrum of the hydrophobic sequence of protein, which is the key step on using continuous wavelet transform (CWT) to predict a-helices and connecting peptides.
出处 《Chinese Chemical Letters》 SCIE CAS CSCD 2005年第11期1551-1554,共4页 中国化学快报(英文版)
基金 the National Natural Science Foundation of China(No.20475068) the Guangdong Provincial Natural Science Foundation(No.031577).
关键词 Ant colony algorithm global optimization wavelet power spectrum protein structure prediction. Ant colony algorithm, global optimization, wavelet power spectrum, protein structure prediction.
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