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丙型肝炎病毒C区的DNA改组 被引量:2

DNA shuffling of hepatitis C virus C
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摘要 目的:利用DNA改组技术进行不同基因型别丙型肝炎病毒(HCV)基因组C区的人工进化。方法:首先利用PCR扩增了三段具有较高序列同源性的460 bp基因片段,然后将其等量混合,在Mg2+存在的条件下,用脱氧核糖核酸酶(DNaseⅠ)切割成50 bp左右的小片段。这些小片段在不外加引物的条件下,利用PCR反应进行重聚,再将重聚物经过一轮正常的PCR扩增。结果:获得了与原片段大小相当的基因片段。结论:这一技术为进一步筛选高活性的HCV C区基因打下基础,有利于从一组序列同源性程度较高的基因库构建随机嵌合基因,并为改组其他基因家族提供了借鉴。 Objective :To use DNA shuffling for directed evolution of HCV genotypes. Methods :Three genes of 460 bp were obtained by PCR from genotype, respectively. After mixed with equimolar of each, these genes DNase Ⅰ into small fragments of about 50 bp under the existence of Mg^2+. genome C genes with different three templates with different were further cut randomly by Results: These small fragments were successfully reassembled to form full genes with original size by one round of PCR without any external primers and another round of normal PCR amplification. Conclusion:This shuffling protocol has laid the foundation for further experiments in the screening for high activity of C gene. It may also help to construct chimera genes from a family of genes with high sequence homology and be used to evolve other gene families.
出处 《医学研究生学报》 CAS 2006年第3期195-198,共4页 Journal of Medical Postgraduates
基金 国家自然科学基金资助项目(批准号:30300301)
关键词 肝炎病毒 丙型 DNA改组 重聚PCR 定向进化 Hepatitis, C virus DNA shuffling Re-assembly via PCR Directed evolution
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参考文献15

  • 1Stemmer WPC.DNA shuffling by random fragmentation and reassembly:In vitro recombination for molecular evolution[J].Proc Natl Acad Sci USA,1994,91(22):10747-10751.
  • 2Patten PA,Howard RJ,Stemmer WPC.Applications of DNA shuffling to pharmaceuticals and vaccines[J].Curr Opin Biotechnol,1997,8(6):724-733.
  • 3赵甫涛,李谨革,贾战生.DNA改组及其在疫苗研制中的应用[J].国外医学(流行病学.传染病学分册),2005,32(1):30-33. 被引量:1
  • 4Keenan RJ,Siehl DL,Gorton R,et al.DNA shuffling as a tool for protein crystallization[J].Proc Natl Acad Sci USA,2005,102(25):8887-8892.
  • 5Bernal AJ,Pan Q,Pollack J,et al.Functional analysis of the plant disease resistance gene Pto using DNA shuffling[J].J Biol Chem,2005,280(24):23073-23083.
  • 6Locher CP,Paidhungat M,Whalen RG,et al.DNA shuffling and screening strategies for improving vaccine efficacy[J].DNA Cell Biol,2005,24(4):256-263.
  • 7Muller KM,Stebel SC,Knall S,et al.Nucleotide exchange and excision technology (NExT) DNA shuffling:a robust method for DNA fragmentation and directed evolution[J].Nucleic Acids Res,2005,33(13):e1171-1179.
  • 8Nitkiewicz J.Chronic hepatitis C infection-mechanisms of virus "immune escape"[J].Przegl Epidemiol,2004,58(3):423-433.
  • 9Missale G,Gariant E,Ferrari C.Role of viral and host factors in HCV persistence:which lesson for therapeutic and preventive strategies?[J] Dig Liver Dis,2004,36(11):703-711.
  • 10Dustin LB.Reexaming the role of the humoral immune response in control of hepatitis C virus infection[J].Hepatology,2004,40(3):756-758.

二级参考文献23

  • 1Stemmer WP. DNA shuffling by random fragmentation mid reassembly :In vitro recombination for molecular evolution. Proc Natl Acad Sci USA,1994,91 (22) :1074-10751.
  • 2Patten PA, Howard R J, Stemmer WP. Applications of DNA shuffling to phammceuticals and vaccines. Curr Opin Biotectmol, 1997, 8 (6) : 724-733.
  • 3Kurtzman AL, Govindarajan S, Vahle K, et al. Advances in directed protein evolution by recursive genetic reeombination: applications to therapeutic proteins. Curt Opin Biotechno1,2001,12(4) :361-370.
  • 4Whalen RG, Kaiwar R, Soong NW, et al. DNA shuffling and vaccines.Curr opin Mol Ther,2001,3( 1 ) :31-36.
  • 5Reetz MT. Controlling the enantioselectivity of enzynes by directed evolution: practical and theoretical ramifications. Proc Natl Acad Sci USA,2004,101 (16) :5716-5722.
  • 6van der Veen BA, Potocki-Veronesc G, Albenne C, et al. Combinatorial engineering to enhance muyllosucrase perfomtance: construction, selection,and screening of variant libraries for increased activity. VEBS Lett,2004,560(1-3) :91-97.
  • 7Bacher JM, Reiss BD, Ellington AD. Anticipatory, evolution and DNA shuffling. Genome Biol, 2002,3 ( 8 ) : 1021.
  • 8Zhao H, Giver L, Shao Z, et al. Molecular evolution by staggered extension process (StEP) in vitro recombination. Nat Biotechnol, 1998, 16(3):258-261.
  • 9Crameri A, Raillard SA, Bermudez E, et al. DNA shuffing of a fantily of genes from diverse species accelerates directed evolution. Nature, 1998,391 (6664) :288-291.
  • 10Cohen J. Breeding' antigens for new vaccines. Science, 2001, 293(5528) : 236-238.

共引文献5

同被引文献44

  • 1Mei-Mei Shan,Ke-Zhou Liu,Hai-Lin Fang,Zhi Chen the Institute of Infections Diseases, Zhejiang Univiersity School of Medicine, Hangzhou 310006, China.DNA immune responses induced by codelivery of IL-12 expression vectors with hepatitis C structural antigens[J].Hepatobiliary & Pancreatic Diseases International,2002,1(4):553-557. 被引量:3
  • 2Li-XinZhu JingLiu YeYe You-HuaXie Yu-YingKong Guang-DiLi YuanWang.A candidate DNA vaccine elicits HCV specific humoral and cellular immune responses[J].World Journal of Gastroenterology,2004,10(17):2488-2492. 被引量:12
  • 3许小亮,李君武.丙型肝炎病毒非结构蛋白3蛋白酶抑制剂的研究进展[J].医学研究生学报,2005,18(10):930-933. 被引量:3
  • 4Stemmer W P.Rapid evolution of a protein in vitro by DNA shuffling[J].Nature,1994,370 (6488):389-391.
  • 5Stemmer W P.DNA shuffling by random fragmentation and reassembly:in vitro recombination for molecular evolution[J].Proc Natl Acad Sci,1994,91(22):10747-10751.
  • 6Bacher J M,Reiss B D,Ellington A D.Anticipatory evolution and DNA shuffling[J].Genome Biol,2002,3(8):1021-1024.
  • 7Crameri A,Whitehorn E A,Tate E,et al.Improved green fluorescent protein by molecular evolution using DNA shuffling[J].Nat Biotechnol,1996,14(3):315-319.
  • 8Cohen J.'Breeding' antigens for new vaccines[J].Science,2001,293(5528):236-238.
  • 9Luginbühl B,Kanyo Z,Jones R M,et al.Directed evolution of an anti-prion protein scFv fragment to an affinity of 1 pM and its structural interpretation[J].J Mol Biol,2006,363(1):75-97.
  • 10Van der Linden R H,de Geus B,Frenken G J,et al.Improved production and function of llama heavy chain antibody fragments by molecular evolution[J].J Biotechnol,2000,80(3):261-270.

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