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相手蟹属两种蟹类线粒体16S rRNA基因序列的比较 被引量:13

Sequence Comparison of Mitochondrial 16S rRNA Gene between Two Species in Sesarma sp.
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摘要 测定了相手蟹属红螯相手蟹和褶痕相手蟹线粒体16S rRNA基因部分片段的序列,二者的序列长度相同,均为533bp,且A、T、D、C的含量相似,分别为198bp(37.1%),206bp(38.6%),84bp(15.8%),45bp(8.4%)和200bp(37.5%),205bp(38.5%),81bp(15.2%),47bp(8.8%);二者的序列有49处差异,其中21个位点为转换、22个位点为颠换和6个缺失/插入位点。进一步对20种相手蟹属蟹类的长度为361bp的16S rRNA基因同源序列进行分析,发现AT的含量为78.6%~82.9%,明显高于GC的含量,且存有91个变异位点。从NJ树和遗传距离来看,在分布于中国的3种相手蟹中,无齿相手蟹和红螯相手蟹的亲缘关系最近(d=0.0151),而它们与褶痕相手蟹的亲缘关系则较远(d=0.0924/0.0923)。分布于中国的相手蟹和分布于北美的相手蟹之间存在着较大的遗传距离(差异),表明它们之间有着较远的亲缘关系,互为单系起源。 Partial sequences of the mitochondrial 16S rRNA gene were determined for two species (Sesarma haematocheir and S. plicata) in Genus Sesarma. It was found that the length of sequence was the same for S. haematocheir and S. plicata. Among the 533 nucleotides obtained, the A, T, G and C contents were all similar, 198bp (37. 1%), 206 bp (38.6%), 84 bp (15.8%), 45 bp (8.4%) and 200 bp (37.5%), 205 bp (38.5%) , 81 bp (15.2%), 47 bp (8.8%), respectively. There were 49 different sites between the two spe- cies, including 21 transition sites, 22 transversion sites and 6 deletion/insertion sites. Furthermore, 361 bp homologous fragment was analyzed to discuss the phylogenetie relationship among 20 Sesarma species. The results showed that there were higher A and T contents (78.6% -82.9% ) than G and C contents. There were 91 variable positions of 16S rRNA sequences among the 20 species. Among 3 Sesarma species in China, S. dehaani and S. haematocheir were the closely related ( d = 0. 0151 ) ; and there were greater genetic distances between S. plicata and S. dehaani / S. haematocheir (d = 0. 0924/0. 0923). The average genetic distances of S. plicata, S. dehaani and S. haematocheir, compared with the North American crabs of genus Sesarma, were 0. 1032 ± 0. 0089, 0. 0783 ± 0. 0105 and 0. 0720 ± 0.011, respectively, indicating that there were greater genetic differ enees between China and North American Sesarma crabs and that they were monophyletie each other.
出处 《水产科学》 CAS 北大核心 2006年第9期443-447,共5页 Fisheries Science
关键词 红螯相手蟹 褶痕相手蟹 16S RRNA 系统发生 Sesarma haematocheir S. plicata 16S rRNA phylogeny
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参考文献18

  • 1Schubart C D,Diesel R,Hedges S B.Rapid evolution to terrestrial life in Jamaican crabs[J].Nature,1998(393):363-365.
  • 2Schubart C D,Cuesta J A,Diesel R,et al.Molecular phylogeny,taxonomy,and evolution of nonmarine lineages within the American Grapsoid crabs (Crustacea:Brachyura)[J].Molecular Phylogenetics and Evolution,2000a,15(2):179-190.
  • 3Schubart C D,Neigel J E,Felder D L.The use of the mitochondrial 16S rRNA gene for phylogenetic and biogeographic studies of Crustacea[J].Crustacean Issues,2000b(12):817-830.
  • 4孙红英,周开亚,杨小军.从线粒体16S rDNA序列探讨绒螯蟹类的系统发生关系[J].动物学报,2003,49(5):592-599. 被引量:28
  • 5Avise J C.Phylogeography[M].London:Harvard University Press,2000:10-12.
  • 6Brown W M.Evolution of mitochondrial DNA[G]//Nei M,Kochn R.Evolution of genes and proteins.Sunderland MA,Sinauer,1983:62-88.
  • 7吕国庆,李思发.鱼类线粒体 DNA 多态研究和应用进展[J].中国水产科学,1998,5(3):94-99. 被引量:77
  • 8Harrison J S.Evolution,biogeography,and the utility of mitochondrial 16S and COI genes in phylogenetic analysis of the crab genus Austinixa (Decapoda:Pinnotheridae)[J].Molecular Phylogenetics and Evolution,2004(30):743-754.
  • 9邱高峰,徐巧婷,王丽卿,范浄,陈雪菁.四种绒螯蟹分子分类与系统发育[J].动物学报,2001,47(6):640-647. 被引量:23
  • 10Schubart C D,Neigel J E,Felder D L.Molecular phylogeny of mud crabs (Brachyura:Panopeidae) from the northwestern Atlantic and the role of morphological stasis and convergence[J].Marine Biology,2000c(137):11-18.

二级参考文献33

  • 1戴爱云.绒螯蟹属的支序分类学的初步分析[J].动物分类学报,1988,13(1):22-25.
  • 2Li Q W,动物学报,2000年,46卷,2期,209页
  • 3Guo J Y,The Ruffles Bulletinof Zoology,1997年,45卷,2期,445页
  • 4Chan T Y,J Crustacean Biol,1995年,15卷,2期,301页
  • 5Kumar S,MEGA:Molecular Evolutionary Genetics Analysis Version 101,1993年
  • 6戴爱云,动物分类学报,1988年,13卷,1期,22~25页
  • 7Chan, T. Y. , M. S. Hung and H. P. Yu 1995 Identity of Eriocheir recta (Stimpson, 1858 ) ( Decapoda, Brachyura) with descriptionof a new crab from Taiwan. J. Crust. Biol. 15 (2):301 ~308.
  • 8戴爱云.绒螯蟹属支序分类学的初步分析[J].动物分类学报,1988,13(1):22-26.
  • 9Dai, A. Y. 1991 Studies on the subspecies differentiation of the genus Eriocheir (Decapoda, Brachyura). In: Zhang, G. X. ed.Sci. Treat. Syst. Evol. Zool. Beijing: China Sci. Techn. Publ.House,Vol 1:61-71.[戴爱云 1991 绒螯蟹属亚种分化的研究(十足目,短尾派).见张广学主编.系统进化动物学重点实验室论文集(第一集).北京:中国科学技术出版社,61-71.]
  • 10Felsenstein, J. 1993 PHYLIP (Phylogeny Inference Package) version 3.5c. Seattle: University of Washington.

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