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Isolation and Expression Analysis of a Novel Abiotic Stress-Induced Gene W89 from Wheat 被引量:1

Isolation and Expression Analysis of a Novel Abiotic Stress-Induced Gene W89 from Wheat
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摘要 Water stress and cold stress are important factors restricting plant growth. However, there is little knowledge on the function of stress-responsive genes in plants. Therefore, it is necessary to clone some important genes to study the mechanism of plant adaptation to abiotic stress for improvement of plant resistance. A putative water stress-induced gene, W89, was cloned from the eDNA library of drought-treated wheat seedlings by phage hybridization in situ, and its entire length was obtained using 5'-rapid amplification of eDNA ends (RACE) and reverse transcription-polymerase chain reaction (RT-PCR). The full-length eDNA of W89 consists of 2 392 bp and contains a 1 896 bp open reading frame (ORF) encoding a 631 amino acid protein. Southern blot analysis indicated that W89 was a single-copy gene. RT-PCR analysis revealed that the expression of W89 was upregulated by drought, cold, and abscisic acid (ABA). Amino acid sequence analysis discovered that W89 had a conserved region of DUF248 (pfam03141), which contained a methyltransferase domain with a sterile alpha motif (SAM)-binding motif. Phylogenetic analysis showed that W89 was 66% identical to Oryza sativa dehydration-responsive protein (BAD67956). It was supposed that W89 was a novel dehydration-responsive protein encoding gene. On the basis of the functions of methyltransferase and the SAM-binding motif, the SAM-binding motif of W89 was supposed to be connected with other proteins or transcription factors to transduce stress signals and finally regulate the expression of stress-responsive genes on the early stage of drought stress. Water stress and cold stress are important factors restricting plant growth. However, there is little knowledge on the function of stress-responsive genes in plants. Therefore, it is necessary to clone some important genes to study the mechanism of plant adaptation to abiotic stress for improvement of plant resistance. A putative water stress-induced gene, W89, was cloned from the eDNA library of drought-treated wheat seedlings by phage hybridization in situ, and its entire length was obtained using 5'-rapid amplification of eDNA ends (RACE) and reverse transcription-polymerase chain reaction (RT-PCR). The full-length eDNA of W89 consists of 2 392 bp and contains a 1 896 bp open reading frame (ORF) encoding a 631 amino acid protein. Southern blot analysis indicated that W89 was a single-copy gene. RT-PCR analysis revealed that the expression of W89 was upregulated by drought, cold, and abscisic acid (ABA). Amino acid sequence analysis discovered that W89 had a conserved region of DUF248 (pfam03141), which contained a methyltransferase domain with a sterile alpha motif (SAM)-binding motif. Phylogenetic analysis showed that W89 was 66% identical to Oryza sativa dehydration-responsive protein (BAD67956). It was supposed that W89 was a novel dehydration-responsive protein encoding gene. On the basis of the functions of methyltransferase and the SAM-binding motif, the SAM-binding motif of W89 was supposed to be connected with other proteins or transcription factors to transduce stress signals and finally regulate the expression of stress-responsive genes on the early stage of drought stress.
出处 《Agricultural Sciences in China》 CAS CSCD 2007年第4期391-398,共8页 中国农业科学(英文版)
关键词 WHEAT water stress COLD gene cloning wheat, water stress, cold, gene cloning
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  • 1Ming-der Shih,Shu-chin Lin,Jaw-shu Hsieh,Chi-hua Tsou,Teh-yuan Chow,Tsai-piao Lin,Yue-ie C. Hsing.Gene cloning and characterization of a soybean (Glycine max L.) LEA protein, GmPM16[J].Plant Molecular Biology.2004(5)
  • 2Jian-Quan Chen,Yi Dong,Yu-Jun Wang,Qiang Liu,Jin-Song Zhang,Shou-Yi Chen.An AP2/EREBP-type transcription-factor gene from rice is cold-inducible and encodes a nuclear-localized protein[J].Theoretical and Applied Genetics.2003(6)
  • 3Y.-G. Shen,W.-K. Zhang,S.-J. He,J.-S. Zhang,Q. Liu,S.-Y. Chen.An EREBP/AP2-type protein in Triticum aestivum was a DRE-binding transcription factor induced by cold, dehydration and ABA stress[J].Theoretical and Applied Genetics.2003(5)

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