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Comparison of the unlabeled and labeled pre-mRNA splicing assays in vitro

Comparison of the unlabeled and labeled pre-mRNA splicing assays in vitro
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摘要 Pre-mRNA splicing is a fundamental process required for the expression of most metazoan genes. It is carried out by the spliceosome that catalyzes the removal of non-coding intron sequences to ligate exons into mature mRNA prior to transport and translation. The purpose of our study is to explore whether the in vitro unlabeled pre-mRNA splicing assay could be performed as an alternative method of splicing reaction other than the radiolabeled one. Two different splicing methods in vitro , P labeled and unlabeled pre-mRNA as the substrates in the reaction, were investigated. The radiolabeled products were visualized by autoradiography while the unlabeled products were observed by Ethidium Bromide (EB) staining. As a result, although there are more unspecific bands in the EB staining assay than 32P labeled one, the RNA products of in vitro splicing could be observed clearly. This suggests that the unlabeled pre-mRNA splicing assay can be an optional substitution for the isotope-labeled assay. Pre-mRNA splicing is a fundamental process required for the expression of most metazoan genes. It is carried out by the spliceosome that catalyzes the removal of non-coding intron sequences to ligate exons into mature mRNA prior to transport and translation. The purpose of our study is to explore whether the in vitro unlabeled pre-mRNA splicing assay could be performed as an alternative method of splicing reaction other than the radiolabeled one. Two different splicing methods in vitro, 32p labeled and unlabeled pre-mRNA as the substrates in the reaction, were investigated. The radiolabeled products were visualized by autoradiography while the unlabeled products were observed by Ethidium Bromide (EB) staining. As a result, although there are more unspecific bands in the EB staining assay than 32p labeled one, the RNA products of in vitro splicing could be observed clearly. This suggests that the unlabeled pre-mRNA splicing assay can be an optional substitution for the isotope-labeled assay.
出处 《Journal of Microbiology and Immunology》 2006年第4期313-317,共5页 中华微生物学和免疫学(英文版)
基金 We thank Hao Zhang for technical assistance, Dr. Robin Reed for providing AdML plasmids. The work was supported by grants from National Natural Science Foundation of China (30670441, 30300070) Program for New Century Excellent Talents in University (NCET-04-0245) Specialized Fund for the Doctoral Program of Higher Education (20040062003) Tianjin Municipal Science and Technology Commission (043802811).
关键词 pre-mRNA剪接 体外试验 同位素标记 未标记 比较研究 Pre-mRNA splicing Spliceoseme Ethidiurn Bromide staining Autoradiography
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参考文献10

  • 1Martin JH,Chin RY,Matthew VK,Klemens JH.Linking splicing to polⅡtranscription stabilizes premRNAs and influences splicing patterns[].Plos Biology.2006
  • 2Neugebauer KM.On the importance of being co-transcriptional[].Journal of Cell Science.2002
  • 3Green MR.Biochemical mechanisms of constitutive and regulated pre-mRNA splicing[].Annual Review of Cell Biology.1991
  • 4Jurica MS,Moore MJ.Pre-mRNA splicing: a wash in a sea of proteins[].Molecular Cell.2003
  • 5Mingjuan L,Robin R.Splicing is required for rapid and efficient mRNA export in metazoans[].Proceedings of the National Academy of Sciences of the United States of America.1999
  • 6Dignam JD,Lebovitz RM,Roeder RG.Accurate transcription initiation by RNA polymeraseⅡin a soluble extract from isolated mammalian nuclei[].Nucleic Acids Research.1983
  • 7Zhaolan Z,Lawrence JL,Steven PG,Robin R.Comprehensive proteomic analysis of the human spliceosome[].Nature.2002
  • 8Monsalve M,Wu Z,Adelmant G,Puigserver P,Fan M,Spiegelman BM.Direct coupling of transcription and mRNA processing through the thermogenic coactivator PGC-1[].Molecular Cell.2000
  • 9Lamond AI,Spector DL.Nuclear speckles: a model for nuclear organelles[].Nature Reviews Molecular Cell Biology.2003
  • 10Turner IA,Norman CM,Chrucher MJ,Newman AJ.Roles of the U5 snRNP in spliceosme dynamics and catalysis[].Biochemical Society Symposia.2004

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