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甜槠种群遗传多样性的简单重复序列区间初步分析 被引量:3

Primary study on genetic variation and genetic diversity among Castanopsis eyrei populations based on inter-simple sequence repeat(ISSR) markers
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摘要 应用简单重复序列区间(ISSR)分子标记方法对甜槠种群的遗传多样性和遗传分化进行了初步研究.从100个引物中筛选出12个用于正式扩增的ISSR引物,在9个种群179个个体中共检测到202个位点,其中198个是多态位点,多态位点百分率(P)为98.02%.各种群多态位点百分率在60.40%~70.30%,平均为65.29%.甜槠物种水平的Shannon信息指数(I)为0.5322、Nei指数(h)为0.3597.各种群J平均为0.3635、h平均为0.2468.AMOVA分子差异分析表明,65.96%的变异存在于种群内,34.04%的变异存在于种群间,种群间的基因分化系数(GST)为0.3138.甜槠种群间的基因流(Nm)为1.0933.9个种群的平均遗传距离为0.1849,遗传距离与地理距离呈显著正相关.利用UPGMA法对9个种群进行聚类,结果显示浙江省内的8个种群聚成一类,庐山种群单独成一类. Using inter-simple sequence repeat (ISSR) makers, genetic diversity and genetic differentiation within and among Castanopsis eyrei populations were primarily analyzed. A total of 202 bands were detected from 9 populations with 179 individulas by 12 reliable primers. Among of them, 198 bands were polymorphic and the percentage of polymorphic loci was 98. 02%. The percentage of polymorphic loci of Castanopsis eyrei populations ranged ftom 60.40% to 70.30% with an average of 65.29%. Shannon information index (I) and Nei's gene index (h) at species level were 0. 532 2 and 0. 359 7, respectively, while those at population level averged 0. 363 5 and 0. 246 8, respec- tively. Analysis of molecular various showed that 65.96% of the total variation was distributed among populations, while only 34.04% was distributed among individuals within populations. The gene differentiation coefficient (GST) among populations was 0. 313 8 and the estimated gene flow was 1. 093 3. The average pairwise genetic distance of 9 populations was 0. 184 9. Significant correlation was found between Nei's genetic distance and geographical dis- tance. Using unweighted pair group method arithmatic average (UPGMA), the nine populations could be clustered into three groups, while LS population occupied one group by itself.
出处 《浙江大学学报(理学版)》 CAS CSCD 北大核心 2007年第6期672-678,共7页 Journal of Zhejiang University(Science Edition)
基金 浙江省自然科学基金资助项目(Y504220)
关键词 甜槠 遗传多样性 遗传分化 简单重复序列区间(ISSR) Castanopsis eyrei genetic diversity genetic differntiation inter-simple sequence repeat(ISSR)
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