期刊文献+

α-丙氨酸构象的理论计算 被引量:2

Theoretical Calculation on the Conformers of α-Alanine
下载PDF
导出
摘要 用Hyperchem软件中的构象搜寻模块,对α-丙氨酸进行系统构象搜索,寻找分子低能构象.用B3LYP/6-311++G(d,p)法优化计算13个低能构象,PCM(Polarizable Continuum Models)用于水相计算,获得低能构象的优化几何结构、分子总能量和标准吉布斯自由能.较详细地讨论了α-丙氨酸各构象的相对稳定性,水的溶剂化作用对其能量、几何构型和偶极距的影响等问题.此外,还探讨了一水合丙氨酸的几何构型和能量性质. Using the conformational search model of hyperchem, we have searched low energy conformations of α-alanine by the parameter of the dihedral angle. Molecular structures of 13 conformers of α-alanine were calculated by the B3LYP/6-311 ++ G( d, p) method both in the gas and aqueous phases with full geometry optimization, The PCM( Polarizable Continuum Models) was employed for aqueous solution calculations, The optimized Structures, total molecular energy and standard free energy were obtained, The solvent effects on the optimized structures, energies and dipole moments were discussed in detail, Finally, the structures and energies of monohydrate alanine have been investigated at the same level in the gas phase.
作者 李宝宗
出处 《化学研究》 CAS 2008年第3期95-98,共4页 Chemical Research
基金 国家自然科学基金资助项目(20673075)
关键词 Α-丙氨酸 密度泛函理论 构象异构体 自洽反应场方法 α-alanine density functional theory conformer self-consistent reaction field
  • 相关文献

参考文献7

  • 1Cao M, Newton S Q, Pranata J, et al. Ab initio conformational analysis of alanine [ J ]. J Mol Struct, 1995,332 (3) : 251 -267.
  • 2Csaszar A G. On the structures of free glycine and α-alanine[J]. J Mol Struct, 1995, 346( 1 ) : 141 - 152.
  • 3孟祥军.丙氨酸分子的构象研究[J].唐山师范学院学报,2005,27(2):25-27. 被引量:3
  • 4张荣,罗三来,郑敦胜.生物分子溶液中的弱相互作用研究进展[J].化学研究,2008,19(1):102-105. 被引量:5
  • 5李宝宗.可乐定分子构象异构和互变异构的理论研究[J].化学学报,2006,64(4):278-282. 被引量:16
  • 6Got oh , Kawashima Y, Kashimura M, et al. Origin of regioselectivity in the O-methylation of erythromycin as elucidated with the aid of computational conformational space search [J]. J Chem Soc Perkin Trans, 1993, (9) : 1647 -1654.
  • 7Cossi M, Scalmani G, Rega N, et al. New developments in the polarizable continuum model for quantum mechanical and classical calculations on molecules in solution [ J ]. J Chem Phys, 2002, 117 ( 1 ) : 43 - 54.

二级参考文献37

共引文献20

同被引文献13

  • 1孟祥军.丙氨酸分子的构象研究[J].唐山师范学院学报,2005,27(2):25-27. 被引量:3
  • 2Wermuth C G, The practice of medical chemistry[ M]. London: Academic press, 2003.
  • 3Gotoh , Kawashima Y, Kashimura M, et al. Origin of regioselectivity in the O-methylation of erythromycin as elucidated with the aid of computational conformational space search [ J]. J Chem Soc Perkin Trans, 1993, (9) : 1647-1654.
  • 4Cossi M, Scalmani G, Rega N, et al. New developments in the polarizable continuum model for quantum mechanical and classical calculations on molecules in solution[ J]. J Chem Phys, 2002, 117 (1) : 43-54.
  • 5M. Cao, S. Q. Newton, J. Pranata,et al. Ab initio conformational analysis of alanine[J]. J. Mol. Struct. (Theochem), 1995,332 : 251 -- 267.
  • 6A. G. Csdszdr. On the structures of free glycine and o -alanine[J].J. Mol. Struct. ,1995,346:141--152.
  • 7P. Selvarengan, P. Kolandaive. Potential energy surface study on glycine, alanine and their zwitterionic forms [J].J. Mol. Struct. (Theochem), 2004,671:77--86.
  • 8D. M. Upadhyay, A. K --initio and density func forms of alanine and seri ous medium[J]. Spectr 909--918. umarRai, D. K. Rai,etal. Ab study of L-- ne in gas phase and b and D - ulk aque ochimiea Acta Part, 2007,66.-.
  • 9Lwdin. Quantum Theory of Many Systems. III. Extension of the Hartree--Fock Scheme to Include Degenerate Systems and Correlation Effects [J].Phys. Rev. ,1955, 97:1509--1520.
  • 10K. Fukui. A molecular theory of reactivity in aromatic hydroearbons[J], J. Chem. Phys. , 1952,20 : 722 -- 725.

引证文献2

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部