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内参基因β-actin质粒标准品的构建 被引量:12

Plasmid construction of reference gene beta-actin
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摘要 为构建检测内参基因β-actin mRNA表达水平差异的标准品,以成人外周血细胞的总RNA为模板、Random 6 mers为引物反转录合成cDNA,用该cDNA为模板PCR扩增人β-actin基因相应的cDNA片段,构建PMD-18-β-actin重组质粒,鉴定测序后,用荧光定量PCR制作标准曲线。结果外周血提取的总RNA完整性良好,构建的β-actin质粒经PCR扩增后得到一186bp的清晰条带,测序结果与目的片段完全一致,且质粒的原始浓度为2.39×1013 copies/mL,倍比稀释至2.0×104copies/mL均能得到良好的标准曲线(R2=1),提示构建β-actin基因荧光定量PCR标准质粒成功。 To clone human β-actin cDNA and using it as the standard for real-time quantifying β -actin mRNA. Total RNA was extracted from the adult peripheral blood cells and reverse transcribed to cDNA using Random 6 mers as primer. Amplified β -actin cDNA was ligated with pMD 18-T simple vector and transformed to bacteria JM109. Plasmids were extracted from positive clones and identified with polymerase chain reaction (PCR), and then were subjected to sequencing. Total RNA extracte4 from the adult peripheral blood cells was perfected. The PCR of β -actin plasmid was a 186 bp clear stripe, and the DNA sequencing of β -actin was according with aimed fragment (100%). The original concentration was 2.39 × 10^13 copies/mL, and then diluted to 2.0 × 10^4 copies/mL with multiple proportions, perfected standard curve could be all received (R2= 1). The recombined plasmids containing human β -actin cDNA have been constructed successfully.
出处 《中国组织工程研究与临床康复》 CAS CSCD 北大核心 2008年第48期9501-9504,共4页 Journal of Clinical Rehabilitative Tissue Engineering Research
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参考文献12

  • 1Bustin SA, Benes V, Nolan T, et al. Quantitative real-time RT-PCR-a perspective. J Mol Endocrino12005;34(3):597-601
  • 2Espy MJ, Uhl JR, Sloan LM, et al. Real-time PCR in clinical microbiology: applications for routine laboratory testing. Clin Microbiol Rev 2006; 19(1): 165-256
  • 3Chen FH, Wang L, Hu LH. Linchuang Jianyan Zazhi 2005; 23 (5): 393-395
  • 4陈凤花,王琳,胡丽华.实时荧光定量RT-PCR内参基因的选择[J].临床检验杂志,2005,23(5):393-395. 被引量:58
  • 5Revillion F, Pawlowski V, Hornez L, et al. Glyceraldehyde-3-phosphate dehydrogenase gene expression in human breast cancer. Eur J Cancer 2000;36(8): 1038-1042
  • 6Vila MR , Nicolas A , Morote J , et al . Increased giyceroldehyde-3-phosphate dehydrogenase expression in renal cell carcinoma identified by RNA-based, arbi~arily primed polymerase chainreaction. Cancer2000; 89(1):152-164
  • 7Mori R, Wang Q, Danenberg KD,et al. Both beta-actin and GAPDH are useful reference genes for normalization of quantitative RT-PCR in human FFPE tissue samples of prostate cancer. Prostate 2008 ;68(14): 1555-1560
  • 8Zhu G, Chang Y, Zuo J, et al. Fudenine, a C-terminal truncated rat homologue of mouse prominin, is blood glucose-regulated and can up-regulate the expression of GAPDH. Biochem Biophys Res Commun 2001; 281(4): 951-956
  • 9Tricarico C, Pinzani P, B ianchi S, et al. Quantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue :biopsies. Anal Biochem2002; 309(2): 293-300
  • 10Lossos IS, Czerwinski DK, Wechser MA, et al. Optimization of quantitative real-time RT-PCR parameters for the study of lymphoid malignancies. Leukemia 2003, 17(4): 789-795

二级参考文献15

  • 1Bustin S A. Quantification of mRNA using real-time reverse transcription PCR ( RT-PCR ): trends and problems [ J ]. J Mol Endocrinol,2002,29( 1 ) :23-39.
  • 2Schmid H, Cohen C D, Henger A, et al. Validation of endogenous controls for gene expression analysis in microdissected human renal biopsies[ J]. Kidney Int ,2003,64 ( 1 ) :356-360.
  • 3Vandesompele J, Preter K D, Pattyn F, et al. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes [ J ]. Genome Biol, 2002, 3 ( 7 ):research0034.1-0034.11.
  • 4Kim S and Kim T. Selection of optimal internal controls for gene expression profiling of liver disease [ J ]. Bio Techniques, 2003,35(3) :456-460.
  • 5Lupberger J, Kreuzer K A, Baskaynak G, et al. Quantitative analysis of beta-acfin, β2-microglobulin and porphobilinogen deaminase mRNA and their comparison as control transcripts for RT-PCR[ J ].Mol Cell Probes, 2002,16 ( 1 ): 25-30.
  • 6Beillard E, Pallisgaard N ,van der Velden V H J ,et al. Evaluation of candidate control genes for diagnosis and residual disease detection in leukemic patients using' real-time' quantitative reversetranscriptase polymerase chain reaction (FQ-PCR) -a Europe against cancer program[ J]. Leukemia,2003,17 ( 12 ) :2474-2486.
  • 7Revillion F, Pawlowski V, Hornez L, et al. Glyceraldehyde-3-phosphate dehydrogenase gene expression in human breast cancer [J]. Eur J Cancer,2000,36 ( 8 ): 1038-1042.
  • 8Vila M R, Nicolas A, Morote J, et al. Increased glyceraldehyde-3-phosphate dehydrogenase expression in renal cell carcinoma identified by RNA-based, arbitrarily primed polymerase chain reaction[J]. Cancer,2000,89 ( 1 ) :152-164.
  • 9Zhu G, Chang Y, Zuo J, et al. Fudenine, a C-terminal truncated rat homologue of mouse prominin, is blood glucose-regulated and can up-regulate the expression of GAPDH [ J ]. Biochem Biophys Res Commun,2001,281 (4) :951-956.
  • 10Tricarico C, Pinzani P, Bianchi S, et al. Quantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies [J]. Anal Biochem,2002,309 (2) :293-300.

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