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我国部分区域链格孢属rDNA ITS区序列分析(英文) 被引量:1

Sequence Analysis of ITS Region of rDNA of Alternaria Nees. from Some Areas of China
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摘要 1材料与方法 1.1菌株来源菌株来源见表1。 1.2菌丝体培养将链格孢菌株接种到PDA培养基上,25℃恒温、倒置培养7d左右,用灭菌的刀片将菌丝从培养基上刮下,以备DNA提取用。 [Objective] The study aimed to identify Alternaria Nees from some areas of China at molecular level by analyzing the rDNA ITS sequence. [ Method ] The DNA sequences coding for the 5.8S rDNA and the flanking internal transcribed spacers ( ITS1 and ITS2) were amplified by PCR with universal primers ITS4 and ITS5 and subsequently sequenced for 34 Alternaria isolates from different areas of China. [Result] Sequences analysis showed that 5.8S rDNA was 159 bp and no variation in tested 34 isolates. There had variables sites in ITS. The isolates that had same sequences as A. tenuissima or A. alternata all put up eurytopicity to area and host. The variables sites of the isolates showed the diver- sity of Alternaria in the hosts of Oleaceae, Rosaceae and Solanaceae. At the same time that ITS could not clearly separated the isolates was indicated. The results indicated that the phylogenetic relationship were not closely related to the geographical origin and hosts of these isolates. [ Conclusion] The sequence analysis of ITS region could provide theory basis for the identification of Alternaria Nees..
出处 《Agricultural Science & Technology》 CAS 2009年第1期51-55,共5页 农业科学与技术(英文版)
基金 Supported by National Natural Science Foundation of China(3046003)~~
关键词 链格孢属 RDNA 序列分析 ITS区 分区域 PDA培养基 菌丝体培养 菌株来源 Alternaria Nees. Sequences analysis ITS 5.8SrDNA
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