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血清中HBV cccDNA定量检测方法的建立及临床应用 被引量:1

Quantitative detection and application of HBV cccDNA
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摘要 目的建立一种以TaqMan为探针检测乙型肝炎病毒共价闭合环状DNA(cccDNA)的实时定量PCR检测方法。方法根据rcDNA与cccDNA结构差异,在缺口两侧设计引物,应用TaqMan探针分析,对实时PCR产物进行克隆、测序以证实产物为目的片段;同时对89例符合病毒性乙型肝炎诊断标准的血清样本进行HBVcccDNA和HBV DNA含量检测,3例未感染乙肝病毒的血清作为阴性对照。结果测序结果显示扩增产物为目的片段,检出下限为500 copies/mL;89例样本检测HBV cccDNA的阳性率为55.0%,HBeAg阳性患者阳性率为67.8%,HBeAb阳性患者阳性率为30.0%,HBeAg阳性的样本的平均HBV cccDNA水平高于HBeAb阳性的样本(P<0.05),阴性对照组未检测出HBV cccDNA。应用ROC曲线图评价HBV cccDNA在抗病毒治疗中的价值,其价值为0.927。结论以TaqMan为探针检测血清HBV cccDNA的实时PCR检测方法,具有快速、敏感、特异性高等特点,应用该方法检测HBV cccDNA含量可作为判断临床抗病毒治疗效果的重要参考指标,指导临床用药。 Objective To set up a real-time PCR with Taq enzyme probe for the detection of hepatitis B virus covalently closed circular DNA(cccDNA).Methods Two primers were designed according to structure difference between rcDNA and cccDNA for PCR and TaqMan probe was applied for analysis.Subsequently,PCR products were sequencing for confirmation.Eighty nine serum samples in line with the hepatitis B diagnostic criteria and three samples of healthy people were collected.The samples were quantified for HBV cccDNA and DNA.Results Amplified products were confirmed to be the target segment by sequencing.The lower detection limit was 500copies/ml.The HBV cccDNA positive rates were 55.0%,67.8% and 30.0% in all CHB patients,HBeAg positive patients and HBeAb positive patients,respeitively.The cccDNA positive rate in HBeAg positive patients was significantly higher than that in HBeAb positive patients(P〈0.05).No HBV cccDNA was detected in healthy people.According to ROC curve evaluation,the value of th e HBV cccDNA for antiviral therapy was 0.927.Conclusion A successful real-time PCR detection method with the TaqMan probe to detect the serum of HBV cccDNA is set up with fast,high specificity and high reference value.Quantifying of HBV cccNDA by this method can provide important reference index of predicating the effect of clinical anti-viral treatment and guide clinical medication.
出处 《广东医学》 CAS CSCD 北大核心 2010年第3期294-296,共3页 Guangdong Medical Journal
基金 广东省科技计划项目(编号:2005B36001032)
关键词 乙型肝炎病毒 实时PCR TAQMAN探针 HBV CCCDNA HBV DNA hepatitis B real- time PCR TaqMan probe HBV cccDNA HBV DNA
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  • 1[1]Sells MA, Chen ML, Acs G. Production of hepatitis B virus particles in HepG2 cells transfected with cloned hepatitis B virus DNA. Proc Natl Acad Sci USA 1987; 84:1005-1009
  • 2[2]Hawk CT, Leary SL. Formulary for laboratory animals. Ames,lowa: Iowa State University Press 1987
  • 3[3]Gross-Bellard M, Oudet P, Chambon P. Isolation of high-molecular DNA from mammalian cells. Eur J Biochem 1973; 36:32-38
  • 4[4]Chomczynski P, Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.Anal Biochem 1987; 162:156-159
  • 5[5]Aviv J, Leder P. Preparation of biologically active globin messenger RNA by chromatography on oligothyrnidylic acid-celllose.Proc Natl Acad Sci USA 1972; 69:1408-1412
  • 6[6]Wu CH, Ouyang EC, Walton CM, Wu GY. Human hepatocytes transplanted into genetically immunocompetent rats are susceptible to infection by hepatitis B virus in situ. J Viral Hep 2001;8:111-119
  • 7[7]Yeh CT, Wong SW, Fung YK, Ou JH. Cell cycle regulation of nuclear localization of hepatitis B core protein. Proc Natl Acad Sci USA 1993;90:6459-6463
  • 8[8]Hirt BJ. Selective extraction of polyoma DNA from infected mouse cell cultures. JMol Biol 1967; 26:365-369
  • 9[9]Yuh DD, Gandy KL, Hoyt G, Reitz BA, Robbins RC. Tolerance to cardiac allografts induced in utero with fetal liver cells. Circulation 1996; 94 (Suppl 9):Ⅱ304-Ⅱ307
  • 10[10]Yuh DD, Gandy KL, Hoyt G, Reitz BA, Robbins RC. A rodent model of in utero chimeric tolerance induction. J Heart Lung Transplant 1997; 16:222-230

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  • 1MORALEDA G, SAPUTELLI J, ALDRICH C E, et al. Lack of effect of antiviral therapy in nondividing hepatocyte cultures on the closed ci~ular DNA of woodchuck hepatitis virus [ J]. J Virol, 1997, 71 (12) : 9392 -9399.
  • 2KANN M, BISCHOF A, GERLICH W H. In vitro model for the nuclear transport of the hepadnavirus genome[ J ]. J Virol, 1997, 71(2): 1310-1316.
  • 3KANN M, SODEIK K, VLACHOU A, et al. Phosphorylalion -dependent binding of hepatitis B birus cure panicles to the nuclear pore complex [ J ]. J Cell Biol, 1999, 145 ( 1 ) : 45 - 55.
  • 4REYNOLDS A, LEAKE D, BOESE Q, et al. Rational siRNA de- sign for RNA interference [ J ]. Nat Biotechnol, 2004, 22 ( 3 ) : 326 - 330.
  • 5CHEN Y, CHENG G, MAHATO R I. RNAi for treating hepatitis B viral infection[J].Pharm Res, 2008, 25( 1 ) : 72 -86.
  • 6SEEGER C, MASON W S. Hepatitis B virus biology[ J]. Microb Mol Biol Rev, 2000, 64 ( 1 ) : 51 - 68.
  • 7YEH C T, LIAW Y F, OU J H. The arginine-rich domain of hepatitis B virus precore and core proteins contains a signal for nu- clear transport[J]. J Virol, 1990, 64(12) : 6141 -6147.
  • 8YEH C T, WONG S, FUNG Y K, et al. Cell cycle regulation of nuclear localization of hepatitis B virus core protein[ J]. Proc Natl Acad Sci U S A, 1993, 90(14): 6459-6463.
  • 9SOPHIE I. P, POGAM L, CHUA P K, et al. Exposure of RNA templates anti encapsidation of spliced viral RNA are influenced by the arginine - rich domain of human hepatitis B virus core antigen ( HBcAg 165 - 173) [J]. J Virol, 2005,79(3) : 1871 - 1887.

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