期刊文献+

新型COS标记技术及其在梨属植物系统关系研究中的应用前景 被引量:1

New Conserved Ortholog Set(COS)Markers and its Applications Foreground in Pyrus Phylogenetic Research
下载PDF
导出
摘要 植物系统关系的研究以DNA序列比较分析应用最为广泛;目前,DNA序列分析的发展趋势由常用DNA片段(cpDNA,nrDNA)向低拷贝核基因(Low-copy nuclear gene,LCNG)分析发展,COS(Conserved Ortholog Set)标记就属于这一类低拷贝核基因,笔者对新型COS标记的特点、COS标记的开发和应用进行综述,同时探讨其在梨属植物系统关系研究中的应用前景,从而为解决梨属植物的系统演化问题提供一种新的手段。 DNA sequence comparison analysis is most abroad in plant phylogenetic research.At present,DNA sequence analysis is changed from common DNA fragment (cpDNA,nrDNA) to LCNG (Low-copy nuclear gene),COS (Conserved Ortholog Set) markers check LCNG site.The characteristics and development of COS markers and also their utilization and applications foreground in Pyrus are briefly reviewed in this article,which could apply a new method for figuring out phylogenetic problems in Pyrus.
作者 鲍露
出处 《中国农学通报》 CSCD 北大核心 2010年第22期34-39,共6页 Chinese Agricultural Science Bulletin
基金 安徽省高校省级自然科学基金研究项目(KJ2007B112)
关键词 梨属 COS标记 系统关系 种源基因 Pyrus COS phylogenetic relationships ortholog gene
  • 相关文献

参考文献5

二级参考文献97

  • 1潘增祥,陈杰,黄瑞华,许丹,徐银学,谢庄,姜志华,刘红林,赵如茜.猪脂肪及肌肉组织中基因表达信息分析[J].Acta Genetica Sinica,2005,32(3):264-274. 被引量:5
  • 2李君明,朱莎,宋燕,张智,Bistra Atanassova,张盛林,徐和金.与番茄Ps-2位点紧密连锁的AFLP分子标记的获得[J].植物遗传资源学报,2006,7(1):35-38. 被引量:4
  • 3Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, Sutton GG, Smith HO, Yandell M, Evans CA, Holt RA. The sequence of the human genome. Science, 2001, 291(5507): 1304-1351.
  • 4Berglund AC, Sjolund E, Ostlund G, Sonnhammer ELL. InParanoid 6: eukaryotic ortholog clusters with inparalogs. Nucleic Acids Res, 2008, 36(1): D263-266.
  • 5Brettin TS, Tapia R, Saw JH, West R, Tseng CH, Song J, Xie G Myers GL. Streptococcus in toto: the orthologous gene Database. 2008. http://iadr.confex.com/iadr/2008Dallas.
  • 6Matsuya A, Sakate R, Kawahara Y, Koyanagi KO, Sato Y, Fujii Y, Yamasaki C, Habara T, Nakaoka H, Todokoro F, Yamaguchi K, Endo T, Oota S, Makalowski W, Ikeo K, Suzuki Y, Hanada K, Hashimoto K, Hirai M, Iwama H,Saitou N, Hiraki AT, Jin L, Kaneko Y, Kanno M, Murakami K, Noda AO, Saichi N, Sanbonmatsu R, Suzuki M, Takeda J, Tanaka M, Gojobori T, Imanishi T, Itoh T. Evola Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees. Nucleic Acids Res, 2008, 36(1): D787-792.
  • 7Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, Agarwal P, Agarwala R, Ainscough R, Alexandersson M, An P. Initial sequencing and comparative analysis of the mouse genome. Nature, 2002, 420(6915): 520-562.
  • 8King DC, Taylor J, Zhang Y, Cheng Y, Lawson HA, Martin J, Chiaromonte F, Miller W, Hardison RC. Finding cis-regulatory elements using comparative genomics: some lessons from ENCODE data. Genome Res, 2007, 17(06): 775-786.
  • 9Miller W, Makova KD, Nekrutenko A, Hardison RC. Comparative genomics. Annu Rev Genomics Hum Genet, 2004, 5: 15-56.
  • 10Nobrega MA, Pennacchio LA. Comparative genomic analysis as a tool for biological discovery. Physiological Soc, 2004, 554 (Pt 1): 31-39.

共引文献31

同被引文献34

引证文献1

二级引证文献1

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部