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云南洱源牛街热泉原核微生物多样性分析 被引量:6

Prokaryotic microbial phylogenetic diversity of "Eryuan Niujie" hot spring in Yunnan province,China
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摘要 【目的】通过分析富含高分子有机物的云南洱源牛街热泉原核微生物16SrRNA基因克隆文库,丰富对高温热泉原核微生物多样性的认识,为进一步开发和利用该热泉微生物资源奠定基础。【方法】构建洱源牛街高温热泉原核微生物16SrRNA基因克隆文库,通过测序和序列相似性比对以及聚类分析研究该热泉原核微生物的多样性。【结果】该热泉原核微生物以细菌为主,包括变形菌门(Proteobacteria)、厚壁菌门(Firmicutes)、梭杆菌门(Fusobacteria)等在内的约10个细菌类群,其中变形菌门中的β-变形菌纲(β-Proteobacteria)为优势菌群,其次为拟杆菌门(Bacteroidetes)、绿菌门(Chlorobi);古菌的生物量和丰度较细菌少,分属广古菌(Euryarchaeota)和泉古菌(Crenarchaeota)两个类群,以广古菌为优势类群。 [Objective]We analyzed the prokaryotic microbial diversity of Eryuan Niujie hot spring,in Yunnan Province,to enrich our knowledge about thermo-stable microbes. [Method]We constructed bacterial and archaeal 16S rRNA gene libraries,analyzed the sequences and constructed phylogenetic trees to learn the prokaryotic microbial diversity. [Result] The majority of the prokaryotic microbes in this hot spring were bacteria,while β-Proteobacteria was the most abundant,next were Bacteroidetes and Chlorobi; the abundance and diversity of archaea were both less than that of bacteria,including Euryarchaeota and Crenarchaeota,while Euryarchaeota was the most abundant.
出处 《微生物学报》 CAS CSCD 北大核心 2010年第11期1510-1518,共9页 Acta Microbiologica Sinica
基金 国家"863计划"重点课题(2007AA100604) 中国科学院知识创新工程重大项目(KSCX1-YW-11B1) 北京市自然基金重点项目(5081001)~~
关键词 16S RRNA基因 原核微生物多样性 高温微生物 热泉 16S rRNA prokaryotic microbial diversity thermophile hot spring
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参考文献18

  • 1Cavichiolli R. Extremophiles and the search for extraterrestrial life. Astrobiology, 2002, 2 ( 3 ) : 281- 292.
  • 2Demirjian DC, Moris-Varas F, Cassidy CS. Enzymes from extremophiles. Current Opinion Chemical Biology, 2001, 5 : 144-151.
  • 3Brock FD, Freeze H. Thermus aquaticus gen. n. and sp. n. , a nonsporulating extreme thermophile. Journal of Bacteriology, 1969, 98 ( 1 ) : 289-297.
  • 4Xiang XY, Dong XZ, Huang L. Sulfolobus tengchongensis sp. nov., a novel thermoacidophilic archaeon isolated from a hot spring in Tengchong, China. Extremophiles, 2003, 7(6): 493-498.
  • 5Vesteinsdottir H, Hydrogenophilus Reynisdottir islandicus sp DB, Orlygsson nov., a novel thermophilic hydrogen oxidizing bacterium isolated from an Icelandic hot spring. International Journal of Systematic and Evolutionary Microbiology, 2010, published March 12, 2010 as doi: 10. 1099/ijs. 0. 023572-0.
  • 6Amman R, Ludwig IW, Schleifer KH. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiological Reviews, 1995, 59(1) : 143-169.
  • 7Meyer-Dombard DR, Shock EL, Amend JP. Archaeal and bacterial communities in geochemically diverse hot springs of Yellowstone National Park, USA. Geobiology, 2005, 33 : 211-227.
  • 8Hall JR, Mitchell KR, Jachson-Weaver O, Kooser AS, Cron BR, Crossey LJ, Takacs-Vesbach CD. Molecular characterization of the diversity and distribution of a thermal spring microbial community by using rRNA and metabolic genes. Applied and Environmental Microbiology, 2008, 74( 15 ) :4910-4922.
  • 9Blank CE, Cady SL, Pace NR. Microbial composition of near-boiling silica-depositing thermal springs throughout Yellowstone National Park. Applied and Environmental Microbiology, 2002, 68(10) : 5123-5135.
  • 10Aditiawati P, Yohandini H, Madayanti F, Akhmaloka. Microbial diversity of acidic hot spring (Kawah Hujan B) in geothermal field of Kamojang area, west Java- Indonesia. The Open Microbiology Journal, 2009, 3:58- 66.

二级参考文献24

  • 1Dawson S, DeLong EF. Phylogenetic and ecological perspectives on uncultured Crenarchaeota and Korarchaeota. In: Falkow, S, Rosenberg E, Schleifer KH, et al. The Prokaryotes. vol. 3.7. New York: Springer, 2001, pp. 281-289.
  • 2Bintrim SB, Donohue TJ, Handelsman J, et al. Molecular phylogeny of Archaea from soil. Proc Natl Acad Sci USA, 1997, 94(1): 277-282.
  • 3Jurgens G, Saano A. Diversity of soil Archaea by phylogeny, PCR-RFLP and DNA-hybridization of 16S rRNA in intact, clear-cut, and clear-cut followed by prescribed burning boreal forest. FEMS Microb Ecol, 1999, 29(2): 205-213.
  • 4Ochsenreiter T, Selezi D, Quaiser A, et al. Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR. Environ Microbiol, 2003, 5(9): 787-797.
  • 5DeLong EF. Archaea in coastal marine environments. Proc Natl Acad Sci USA, 1992, 89(12): 5685-5689.
  • 6MacGregor BJ, Moser DP, Aim EW, et al. Crenarchaeota in Lake Michigan sediment. Appl Environ Microbiol, 1997, 63(3): 1178-1181.
  • 7Stein LY, La Duc MT, Grundl TJ, et al. Bacterial and archaeal populations associated with freshwater ferromanganous micronodules and sediments. Environ Microbiol, 2001, 31(1): 10-18.
  • 8Stein LY, Jones G, Alexander B, et al. Intriguing microbial diversity associated with metal-rich particles from a freshwater reservoir. FEMS Microbiol Ecol, 2002, 42(3): 431-440.
  • 9Beja O, Koonin EV, Aravind L, et al. Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces. Appl Environ Microbiol, 2002, 68(1): 335-345.
  • 10Margot H, Acebal C, Toril E, et al. Consistent association of crenarchaeal Archaea with sponges of the genus Axinella. Mar Biol, 2002, 140(4): 739-745.

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