期刊文献+

一步法荧光定量PCR快速检测肠道病毒EV71 被引量:2

Quickly detection of intestinal EV71 virus by one-step real time RT-PCR
下载PDF
导出
摘要 目的:建立一步法荧光定量RT-PCR方法快速检测肠道病毒EV71。方法:从Genebank中找出最近2-3年中国大陆区域流行的EV71病毒VP1基因的序列进行比对,找出2-3个相对保守区域设计引物及taqman探针。筛选出一套表现良好的引物并进行反应条件的优化。结果:筛选出一套对EV71病毒具有高度灵敏度和特异性的引物及taqman探针,检测灵敏度达10copiesVP1/μL,整个操作过程仅需2-3h。结论:该套引物及探针针对EV71具有良好特性,是用于EV71的日常监测和暴发时的应急诊断。 Objective:To establish an one - step real time RT - PCR technology for quickly detection EV71 virus. Methods:The sequences of VPI gene in EV71 viruses which are recently prevalent in mainland of China were downloaded and compared. Then 2 or 3 comparative conserve regions were selected as the target for real time RT - PCR. Results : The best primers and probe suit of designed primers and probe sets was selected by experiments. The method has high specificity and sensitivity, the detection limit is 10 copies VP1/μL. The detection experiments will cost only 2 -3h. Conclusion:The method has high quality of detection EV71 virus. It can be used as the technology for dally inspection or the emergence method in prevalence of EV71.
作者 毛国梁
出处 《医学信息(中旬刊)》 2011年第5期1896-1897,共2页 Medical Information Operations Sciences Fascicule
关键词 TAQMAN探针 EV71 肠道病毒 一步法荧光定量PCR Taqman probe EV71 Enterovirus One - step real time RT - PCR
  • 相关文献

参考文献9

  • 1周世力,杨帆,金奇.肠道病毒71型的研究进展[J].病毒学报,2003,19(3):284-287. 被引量:102
  • 2HoM,Chen ER,Hsu KH,et al.An epidemic of enterovirus 71 infection in Taiwan[J].N Engl J Med,1999,341:929-935.
  • 3Dolin R.Enterovirus 71-emerging infections and emerging questions[J].N Engl J Med,1999,341(13):948-985.
  • 4Tan E,Yong G,et al.Rapid detection of Enterovirus 71 by real-time TaqMan RT-PCR.Journal of Clinical Virology,2008,42(2):203-206.
  • 5Tan E,Chow K,et al.Specific detection of enterovirus 71 directly from clinical specimens using real-time RT-PCR hybridization probe assay.Molecular and Cellular Probes,2006,20(2):135-140.
  • 6Singh,S.,Chow,V.T.K.,Phoon,M.C.,Chan,K.P.and Poh,C.L.Direct detection of enterovirus 71 (EV71) in clinical specimens from a hand,foot and mouth disease outbreak in Singapore by reverse transcription-PCR with universal enterovirus and EV71-specific primers.J.Clin.Microbiol,2002,40(8),2823-2827.
  • 7张润书.实时荧光定量PCR快速检测肠道病毒EV71[J].中国医学工程,2010,18(3):121-122. 被引量:2
  • 8S.E.Capaul,M.Gorgievski-Hrisohol.Detection of enterovirus RNA in cerebrospinal fluid(CSF)using NucliSens EasyQ Enterovirus assay.Journal of Clinical Virology,2005,32:236-240.
  • 9唐震,单云峰,崔仑标,郭喜玲,李显,吴涛,史智扬.TaqMan荧光定量RT-PCR技术快速检测EV71方法的建立[J].江苏卫生保健(学术版),2010,12(6):8-9. 被引量:2

二级参考文献49

  • 12008年手足口病预防控制指南[J].中华实验和临床感染病杂志(电子版),2008,2(3):210-213. 被引量:156
  • 2黄世旺,卢亦愚,徐丹戈,方叶珍,徐昌平,包芳珍,高海明.TaqMan荧光定量PCR技术快速检测霍乱弧菌方法的建立[J].中国卫生检验杂志,2006,16(8):923-924. 被引量:20
  • 3中华人民共和国卫生部.肠道病毒(EV71)感染诊疗指南(2008年版)[S].2008.
  • 4S.E. Capaul, M. Gorgievski - Hrisohol. Detection of enterovirus RNA in cerebrospinal fluid (CSF) using NucliSens EasyQ Enterovirus assay [J]. Journal of Clinical Virology, 2005,32:236 - 240.
  • 5Jed A. Fuhrman, Xiaolin Liang,et al. Rapid Detection of Enteroviruses in Small Volumes of Natural Waters by Real -Time Quantitative Reverse Transeriptase PCR [J].Appl. Environ. Mierobiol, 2005, 4523 -4530.
  • 6Mc Minn P C. Neurological manifestation of enterovirus 71 infection in children during a hand- foot - and - mouth disease outbreak in western Australia[ J ]. Clin Infect Dis, 2001, 32(15) : 236 - 242.
  • 7Wang S M. Clinical spectrum of enterovirus 71 infection in children in southern Taiwan, with an emphasis on neurological complications [J ]. Clin Infect Dis, 1999, 29( 1 ) : 184 - 190.
  • 8da Silva E E. Role of enterovirus 71 in acute flaccid paralysis after the eradication of poliovirus in Brazil[J ]. Emerg Infect Dis, 1996, 2: 231 - 233.
  • 9Huang C C. Neurologic complications in children with enterovirus 71 infection[J] .New Engl J Med, 1999, 341(3) :936 - 942.
  • 10Chang L Y.Comparison of enterovirus 71 and Coxsackievirus A16 clinical illnesses during the Taiwan enterovirus epidemic, 1998 [J ]. Pediatr Infect Dis J, 1999, 18:1092 - 1096.

共引文献103

同被引文献34

  • 1XING W J, LIAO Q H, VIBOUD C, et d. Hand, foot and mouth disease in China, 2008-12: an epidemiological study[J]. The Lancet Infectious Diseases, 2014, 14(4): 308-318.
  • 2WONG S S :, YIP C C Y, LAU S K P, et d. Human en- terovirus 71 and hand, foot and mouth disease[J]. EpidemMo- gy and Infection, 2010, 138(8): 1071-1089.
  • 3FAUQUET C M, BISHOP D H L, CARSTENS E B, et d. Vires Taxonomy Seventh Report of the International Commit- tee on Taxonomy of Viruses[R]. Universily of Michigan: Inter- national Committee on Taxonomy of Viruses, 2000.
  • 4YANG F, REN L L, XIONG Z H, et al. Enterovirus 71 out- break in the People's Republic of China in 2008[J]. Journal of Clinical Microbiology, 2009, 47(7): 2351-2352.
  • 5TERLETSKAIA-LADMIG E, METZGER C, SCHALASTA G, et al. Evaluation of enterovirus serological tests IgM-EIA and complement fixation in patients with meningitis, confirmed by detection of enteroviral RNA by RT-PCR in cerebrospinal flu- id[J]. Journal of Medical Virology, 2000, 61(2): 221-227.
  • 6BROWN B A, OBERSTE MS, ALEXANDER J P, et al. Molecular epidemiology and evolution of enterovirusT1 strains isolated from 1970 to 199813]. Journal of Virology, 1999, 73(12): 9969-9975.
  • 7MCMINN P C, An overview of the evolution of enterovirus 7 and its clinical and public health significance[J]. FEMS Micro- biology Reviews, 2002, 26(1): 91-107.
  • 8HUANG S C, HSU Y W, WANG H C, et al. Appearance of in- tratypic recombination of enterovirus 71 in Taiwan from 2002 to 20050]. Virus Research, 2008, 131(2): 250-259.
  • 9CARDOSA M J, PERERA D, BROWN B A, et al. Molecular epidemiology of human enterovirus 71 strains and recent out- breaks in the Asia-pacific region: comparative analysis of the VP1 and VP4 genes[J]. Emerging Infectious Diseases, 2003, 9 (4): 461-168.
  • 10TAN E L, YONG L L G, QUAK S H, et al. Rapid detection of Enteruvirus 71 by real-time TaqMan RT-PCR[.1]. Journal of Clini- cal Virology, 2008, 42(2): 203-206.

引证文献2

二级引证文献6

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部