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蛋白质序列的一种新的二维图形表示

New 2-D graphical representation of protein sequences
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摘要 基于氨基酸的五字母模型,提出蛋白质序列的一种二维图形表示方法,然后证明这种图是非退化的.最后用该方法给出了8个物种的β球蛋白序列的图形表示. In this paper,we propose a 2-D graphical representation of protein sequences based on a five-letter model of amino acids,and prove that it doesn't produce the phenomena of degeneracy.Finally,we draw the graphical representation of β-globin sequences of eight species.
出处 《南阳师范学院学报》 CAS 2011年第6期17-20,共4页 Journal of Nanyang Normal University
关键词 蛋白质序列 五字母序列 图形表示 protein sequence five-letter sequence graphical representation
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参考文献5

  • 1Hamori E, Ruskin J. H curves, a novel method of representation of nucleotide series especially suited for long DNA sequences [J]. Biol Chem,1983,258(2) : 1318-1327.
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  • 3Randia M, Zupan J, Vikia -Topig D. On representation of proteins by star-like graphs[J]. J. Mol. Graphics & Model, 2007, 26 : 290-305.
  • 4Li C, Xing L L and Wang X. 2-D graphical representation of protein sequences and its application to coronavirus phylogeny [J]. BMB Reports, 2008, 41:217 -222.
  • 5Wang J and Wang W. A computational approach to simplifying the protein folding alphabet[ J]. Nat. Struct. Biol. , 1999, 6: 1033-1038.

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