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不同海拔高度低氧环境差异对EPAS1基因多态性的影响 被引量:10

Association between diversity of hypoxia at different altitude and the polymorphism ofEPAS1 gene
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摘要 目的研究不同海拔高度的低氧环境差异对内皮PAS蛋白1基因(endothelial PAS domain protein1,EPAS1)的选择作用。方法选取西藏藏族58名(居住海拔约3700米)、青海藏族47名(居住海拔约3100米)、云南藏族43名(居住海拔约2500米)、山东汉族47名(居住海拔约50米)的4个不同海拔高度的群体,应用限制性片段长度多态性一聚合酶链反应技术检测EPAS1基因的14个单核苷酸多态性位点。结果在4个群体中,山东汉族、云南藏族与西藏藏族、青海藏族在大部分位点的等位基因频率、基因型频率以及单倍型频率的差异具有统计学意义;但在山东汉族与云南藏族之间的差异无统计学意义。结论海拔高度不同引起的低氧环境差异有可能对基因EPASj有选择作用。 Objective To study the selection effect of endothelial PAS domain protein 1 (EPAS1)gene induced by high altitude hypoxia environment. Methods Fourteen single nucleotide polymorphism sites (SNPs) of the EPAS1 gene were genotyped using PCR-restriction fragment length polymorphism(PCR- RFLP) in three Tibetan groups (58 samples from Tibetan living in an altitude of about 3700 meters above sea level, 47 from Qinghai province, about 3100 meters above sea level, 43 from Yunnan province, about 2500 meters above sea level), and Han of Shandong (47 samples, about 50 meters above sea level). Results There were significant differences of most SNP allelic, genotypic and haplotypic frequencies when comparing Han of Shandong, Tibetan of Yunnan with Tibetan of Tibetan and Qinghai. But no difference between Han of Shandong and Tibetan of Yunnan was found. Conclusion The EPAS1 gene might be under hypoxic selection induced by high altitude.
出处 《中华医学遗传学杂志》 CAS CSCD 北大核心 2011年第5期583-588,共6页 Chinese Journal of Medical Genetics
基金 国家自然科学基金(30971578)
关键词 内皮PAS蛋白1 单核苷酸多态性 低氧环境 海拔 限制性片段长度多态性 endothelial PAS domain protein 1 single nucleotide polymorphism hypoxi altitude restriction fragment length polymorphism
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参考文献20

  • 1Zhao M, Kong QP, Wang HW, et al. Mitochondrial genome evidence reveals successful Late Paleolithic settlement on the Tibetan Plateau. Proc Natl Acad Sci U S A, 2009, 106:21230- 21235.
  • 2Patel SA, Simon MC. Biology of hypoxiadnducible factor-2alpha in development and disease. Cell Death Differ, 2008, 15: 628- 634.
  • 3Tian H, Mcknight SL, Russell DW. Endothelial PAS domain protein 1 (EPAS1), a transcription factor selectively expressed in endothelial cells. Genes Dev, 1997, 11:72-82.
  • 4Guo SW, Thompson EA. Performing the exact test of Hardy- Weinberg proportion for multiple alleles. Biometrics, 1992, 48: 361-372.
  • 5Beall CM, Brittenham GM, Strohl KP, et al. Hemoglobin concentration of high-altitude Tibetans and Bolivian Aymara. Am J Phys Anthropol, 1998, 106:385-400.
  • 6Beall CM, Strohl KP, Blangero J, et al. Ventilation and hypoxic ventilatory response of Tibetan and Aymara highaltitude natives. Am J Phys Anthropol, 1997, 104:427-447.
  • 7Beall CM. Tibetan and Andean contrasts in adaptation to high- altitude hypoxia. Adv Exp Med Biol, 2000, 475 :63-74.
  • 8Brutsaert TD. Population genetic aspects and phenotypic plasticity of ventilatory responses in high altitude natives. Respir Physiol Neurohiol, 2007, 158 :151-160.
  • 9Sinha S, Ray US, Tomar OS, et al. Different adaptation patterns of antioxidant system in natives and sojourners at high altitude. Respir Physiol Neurobiol, 2009, 167:255-260.
  • 10Sinha S, Ray US, Saha M, et al. Antioxidant and redox status after maximal aerobic exercise at high altitude in acclimatized lowlanders and native highlanders. Eur J Appl Physiol, 2009, 106:807-814.

二级参考文献24

  • 1Ayala FJ. The myth of eve: molecular biology and human origins. Science, 1995, 270(5244): 1930-1936.
  • 2Bamshad M, Wooding SP. Signatures of natural selection in the human genome. Nature Rev Genet, 2003, 4(2): 99-111.
  • 3Ingman M, Kaessmann H, Paabo S, Gyllensten U. Mitochondrial genome variation and the origin of modern humans. Nature, 2000, 408(6813): 708-713.
  • 4Mishmar D, Ruiz-Pesini E, Golik P, Macaulay V, Clark AG, Hosseini S, Brandon M, Easley K, Chen E, Brown MD, Sukernik RI, Olckers A, Wallace DC. Natural selection shaped regional mtDNA variation in humans. Proc Natl AcadSei USA, 2003, 100(1): 171-176.
  • 5Ruiz-Pesini E, Mishmar D, Brandon M, Procaccio V, Wallace DC. Effects of Purifying and Adaptive Selection on Regional Variation in Human mtDNA. Science, 2004, 303(5655): 223-226.
  • 6Kivisild T, Shen P, Wall DE Do B, Sung R, Davis K, Passarino G, Underhill PA, Scharfe C, Torroni A, Scozzari R, Modiano D, Coppa A, de Knijff P, Feldman M, CavaUi-Sforza LL, Oefner PJ. The role of selection in the evolution of human mitochondrial genomes. Genetics, 2006, 172(1): 373-387.
  • 7Elson JL, Turnbull DM, Howell N. Comparative genomic and the evolution of human mitochondrial DNA: assessing the effect of selection. Am J Hum Genet, 2004, 74(2): 229-238.
  • 8Meiklejohn CD, Montooth KL, Rand DM. Positive and negative selection on the mitochondrial genome. Trends Genet, 2007, 23(6): 259-263.
  • 9Weir CL, Cockerham CC. Estimating F-statistics for the analysis of population structure. Evolution, 1984, 38: 1358-1370.
  • 10Nielsen R. Molecular signatures of natural selection. Ann Rev Genet, 2005, 39: 197-218.

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