摘要
本研究的目的是采用荧光定量PCR扩增技术,建立快速检测淡色库蚊CulexpipienspaUens钠离子通道L1014位点击倒抗性(Knockdownresistance,kdr)相关点突变方法,该方法的原理是以突变位点为3’端设计两条特异性上游引物,和一条非特异下游引物组成两对引物平行双管法,用荧光定量PCR扩增快速检测淡色库蚊钠通道L1014F突变的SS,SR,RR3种基因型。用此方法对48个北京淡色库蚊样本进行基因分型,42个样本检测结果与等位基因特异性PCR(AS—PCR)检测结果完全一致,得到ss(TTA/TTA)基因型21个。占50.0%,SR(TTA/TTT)基因型16个,占38.1%,RR(TTT/1W)基因型5个,占11.9%,与测序结果完全一致;另外6个样本检测结果与AS—PCR检测结果不一致,测序显示:TCA(L1014S)、TTC(L1014F)突变备l株,另4株为敏感纯合子。因此,PCRSYBRGREEN扩增灵敏度(93.75%)低于AS.PCR法(100%),但特异性较高,达100%;分析原因可能是被检测样本引物结合部位多态性较高,影响了引物的结合,而AS—PCR凭经验能完成部分结果的判断。综上所述,用PCRSYBRGREEN扩增技术快速检测淡色库蚊的L1014F基因突变仍是一种值得采纳的等位基因分型方法。
To set up a real-time fluorescent quantitative PCR assay for rapid detection point mutation (TTA-TTY of L1014F) in Culex pipiens pallens sodium channel gene-related with knockdown resistance (kdr). Two paired-primers with 3 '-basyl of sense-primer combined on the mutation point were contrived in parallel for each specimen. The specimens can be easily genotyped as SS, RS, RR as same as the AS-PCR did when there was no polymorphism in the target sequence complemented with primers. Of 48 specimens were detected in this assay, 42 specimens showed the same results as AS-PCR did gaining 21 SS genotypes (50. 0% ), 16 SR genotypes (38. 1% ) and 5 RR genotypes ( 11.9% ). There were 2 of other 6 specimens showed substitutions from TTA to TGA and TTC in the allele of LlO14, and 4 SS senotypes in other 4 specimens with polymorphism in the target sequence according to sequencing results. So in brief, the PCR assay showed lower sensitivity (93.75%) than AS-PCR did ( 100% ), but higher specificity ( 100% ) according to direct sequencing.
出处
《寄生虫与医学昆虫学报》
CAS
2011年第3期156-160,共5页
Acta Parasitologica et Medica Entomologica Sinica
基金
国家科技重大专项课题:重要病媒生物监测与传播病原体检测的关键技术研究(No.2008ZXl0004-010)
关键词
荧光定量PCR
淡色库蚊
击倒抗性
钠通道
Real-time fluorescent quantitative PCR
Culex pipiens pallens
Knockdown resistance
Sodium channel