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Testing relative evolutionary rates and estimating divergence times among six genera of Rhizophoraceae using cpDNA and nrDNA sequences 被引量:3

Testing relative evolutionary rates and estimating divergence times among six genera of Rhizophoraceae using cpDNA and nrDNA sequences
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摘要 The molecular phylogenetic trees of 10 species representing 6 genera of the family Rhizophoraceae have been constructed using the sequences of chloroplast genes ma/K and rbcL as well as the ITS regions of nuclear ribosomal DMA. Relative-rate tests between lineages in these phylogenetic trees have been performed. On the basis of the results of the relative-rate tests and related molecular evolutionary rate data, the divergence times between the lineages are estimated as follows: ( i) the first divergence time in these genera is 132.25 million years ago (mya); (ii) the average divergence time between two tribes, i.e. inland Legnotideae (except Carallia brachiata) and mangrove Rhizophoreae, is 64.13 mya; and (iii) the average divergence time between two inland species, C. garciniaefolia and C. pectinifolia, is 19.92 mya. The molecular phylogenetic trees of 10 species representing 6 genera of the family Rhizophoraceae have been constructed using the sequences of chloroplast genesmatK andrbcL as well as the ITS regions of nuclear ribosomal DNA. Relative-rate tests between lineages in these phylogenetic trees have been performed. On the basis of the results of the relative-rate tests and related molecular evolutionary rate data, the divergence times between the lineages are estimated as follows: (i) the first divergence time in these genera is 132.25 million years ago (mya); (ii) the average divergence time between two tribes, i.e. inland Legnotideae (exceptCarallia brachiata) and mangrove Rhizophoreae, is 64.13 mya; and (iii) the average divergence time between two inland species,C. garciniaefolia andC. pectinifolia, is 19.92 mya.
出处 《Chinese Science Bulletin》 SCIE EI CAS 2000年第11期1011-1015,共5页
关键词 RHIZOPHORACEAE CPDNA NRDNA MATK RBCL ITS regions relative-rate test divergence time. Rhizophoraceae cpDNA nrDNA matK rbcL ITS regions relative-rate test divergence time
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参考文献11

  • 1Motoo Kimura.A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences[J].Journal of Molecular Evolution.1980(2)
  • 2KW Hilu,H Liang.The matK gene: sequence variation and application in plant systematics[].American Journal of Botany.1997
  • 3Y. Zhong,W. Li,D. Huang.Theories and methods of cladistics[]..1994
  • 4STEELE PK,VILGALYS R.Phylogenetic analyses of Polemoniaceae using nucleotide sequences of the plastid gene matK[].Systematic Botany.1994
  • 5Albert,V. A.,Backlund,A.,Bremer,K.,Chase,M. W.,Manhart,J. R.,Mishler,B. D.,Nixon,K. C.Functional constraints and rbcL evidence for land plant phylogeny[].Annals of the Missouri Botanical Garden.1994
  • 6Suh Y,Thien L B,Reeve H E.Molecular evolution and phylogenetic implications of internal transcribed spacer sequences of ribosomal DNA in Winteraceae[].American Journal of Botany.1993
  • 7Kumar S,Hedges SB.A molecular timescale for vertebrate evolution[].Nature.1998
  • 8WANG Kaifa,ZHANG Yulan,WANG Yongyuan.Man-grove pollen morphological study and its significance in marinegeological exploration[].Chinese Science.1975
  • 9MULLER J,CARATINI C.Pollen of Rhizophora ( Rhizophoraceae) as a guide fossil[].Pollen et Spores.1977
  • 10MW Chase,E Soltis,RG Olmstead,D Morgan,DH Les,BD Mishler,MR Duvall,RA Price,HG Hills,YL Qiu,KA Kron,JH Rettig,E Conti,JD Palmer,JR Manhart,KJ Sytsma,M Hedren,BS Gaut,RK Jansen,KJ Kim,CF Wimpee,JF Smith,GR Furnier,SH Strauss,QY Xiang,GM Plunkett,PS Soltis.Phylogenetics of seed plants: an analysis of nucleotide sequences from the plastid gene rbcL[].Annals of the Missouri Botanical Garden.1993

同被引文献17

  • 1LIChunxiang,LUShugang,YANGQun.Aian origin for Polystichum (Dryopteridaceae) based on rbcL sequences[J].Chinese Science Bulletin,2004,49(11):1146-1150. 被引量:14
  • 2Masami Hasegawa,Hirohisa Kishino,Taka-aki Yano.Man’s place in Hominoidea as inferred from molecular clocks of DNA[J].Journal of Molecular Evolution (-).1987(1-2)
  • 3Motoo Kimura.A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences[J].Journal of Molecular Evolution.1980(2)
  • 4S. Shi,Y. Huang,Y. Zhong,Y. Du,Q. Zhang,H. Chang,D. E. Boufford.Phylogeny of the Altingiaceae based on cpDNA matK, PY-IGS and nrDNA ITS sequences[J].Plant Systematics and Evolution (-).2001(1-2)
  • 5Masami Hasegawa,Hirohisa Kishino,Taka-aki Yano.Dating of the human-ape splitting by a molecular clock of mitochondrial DNA[J].Journal of Molecular Evolution.1985(2)
  • 6Joseph Felsenstein.Evolutionary trees from DNA sequences: A maximum likelihood approach[J].Journal of Molecular Evolution.1981(6)
  • 7Mussayev,I. F.On geography and phylogeny of some representa- tives of the genus Ephedra L.Bot[].Zhurnal.1978
  • 8Swofford,D. L.PAUP* 4.0[]..1999
  • 9Friedman,W. E.Sexual reproduction in Ephedra nevadensis (Ephedraceae): Further evidence of double fertilization in a non- flowering seed plant, Am[].Journal of Experimental Botany.1990
  • 10Ickert-Bond,S. M.Wojciechowski, M.E. Phylogenetic relation- ships in Ephedra (Gnetales): Evidence from nuclear and chloro- plast DNA sequence data, Syst[].The Botanical Journal.2004

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