期刊文献+

多重置换扩增(MDA)结合荧光PCR对植入前胚胎进行性别诊断的研究 被引量:6

Multiple Displacement Amplification and Subsequent Fluorescent-PCR for Gender Determination in Preimplantation Genetic Diagnosis(PGD)
原文传递
导出
摘要 目的:建立多重置换扩增(MDA)联合荧光PCR对植入前胚胎进行性别诊断的方法,为开展性连锁遗传病的性别筛选提供实验依据。方法:在行IVF-ET助孕的患者中,选取废弃的第3日新鲜或冷冻后的2PN受精胚胎。通过显微操作活检得到单个卵裂球细胞,采用MDA方法对单个/2个卵裂球细胞行全基因组扩增,然后采用荧光PCR方法对AMEL、X22、SRY和XHPRT 4个性染色体相关基因或STR位点进行扩增,对其扩增产物行毛细管电泳检测,分析电泳结果确定植入前胚胎的性别。以父母的外周血单个淋巴细胞作为对照进行分析。结果:①采用蛋白酶K法(n=21)和碱法(n=17)对卵裂球细胞进行裂解行MDA,扩增成功率未见统计学差异(85.7%vs 82.4%,P>0.05);单个卵裂球组(n=15)和2个卵裂球组(n=23)MDA扩增成功率亦未见统计学差异(80.0%vs87.0%,P>0.05)。②利用MDA方法对15个胚胎的单个/2个卵裂球进行扩增,扩增成功率为86.7%(n=13)。13个胚胎中7个为男性,6个为女性,性别检测成功率100%;等位基因脱扣(alleledropout,ADO)发生率为7.7%。结论:PGD中MDA是有效且可靠的全基因组扩增方法,MDA结合荧光PCR可以用于性连锁遗传病的性别筛选、致病基因检测和对胚胎进行HLA分型。 Objective: To establish a preimplantation genetic gender diagnosis method that combined multiple displacement amplification(MDA) with fluorescent PCR so that to provide experimental basis for the sex-linked genetic disease screening of embryos.Methods: The discarded 2 PN derivate embryos of day 3 were collected after embryo transfer and cryopreservation from the patients conducted IVF-ET in our center from Oct.2009 to Apr.2010.One or two blastomeres were biopsied by micromanipulation and whole genome of the blastomere was amplified by multiple displacement amplification(MDA) method,then 4 sex chromosome related genes or STR loci markers(AMEL,X22,SRY and XHPRT) were amplified using fluorescence PCR method and the amplified products and the amplification products were sized using Capillary electrophoretogram to determine the numbers of sex chromosomes.The embryo sex was determined using parent lymphocyte's results as positive control.Results: 1) There was no statistical differences of amplification success rate between the proteinase K(n=21) or Alkaline(n=17) lysing methods(85.7% vs.82.4%,P0.05) and also between single blastomere(n=15) and the two blastomeres(n=23) groups(80.0% vs 87.0%,P0.05).2) The MDA amplification success rate was 86.7%(n=13) in 15 samples of 1 or 2 blastomeres.There were 7 male embryos and 6 female embryos in the 13 embryos.The fluorescent PCR efficiency was 100% and ADO rate was 7.7%.Conclusion: MDA is an efficient and valid whole genome amplification method for PGD.MDA combined with fluorescent PCR can be used for gender determination in the sex-linked genetic disease screening,monogenic inheritance disorder and HLA-typing of embryos.
出处 《生殖与避孕》 CAS CSCD 北大核心 2011年第11期731-739,共9页 Reproduction and Contraception
基金 天津市科技攻关计划重大科技项目 项目号:05YFGZGX0900
关键词 多重置换扩增(MDA) 荧光PCR 等位基因脱扣(ADO) 植入前遗传学诊断(PGD) 全基因组扩增(WGA) X连锁遗传病 multiple displacement amplification(MDA) fluorescent PCR allele dropout(ADO) preimplantation genetic diagnosis(PGD) whole genome amplification(WGA) X-linked genetic disease
  • 相关文献

参考文献13

  • 1Cheung VG, Nelson SF. Whole genome amplification using a degenerate oligonucleotide primer allows hundreds of geno- types to be performed on less than one nanogram of genomic DNA. Proc Natl Acad Sci USA, 1996, 93(25):14676-9.
  • 2Ivanov PL, Fomichev AA. Whole-genome amplification by MDA to improve sensitivity of forensic expert examinationof chromosomal DNA. Sud Med Ekspert, 2008, 51(4): 16-8.
  • 3Corneveaux JJ, Kruer MC, Hu-Lince D, et al. SNP-based chromosomal copy number ascertainment following multiple displacement whole-genome amplification. Biotechniques, 2007, 42(1):77-83.
  • 4Sun G, Kaushal R, Pal P, et al. Whole-genome amplification: relative efficiencies of the current methods. Leg Med (Tokyo), 2005, 7(5):279-86.
  • 5Lledo B, Ten J, Galan FM, et al. Preimplantation genetic diagnosis of Marfan syndrome using multiple displacement amplification. Fertil Steril, 2006, 86(4):949-55.
  • 6Hellani A, Coskun S, Benkhalifa M, et al. Multiple displace- ment amplification on single cell and possible PGD applications. Mol Hum Reprod, 2004, 10( 11):847- 52.
  • 7彭兆锋,孙莹璞.多重置换扩增技术在植入前遗传学诊断中的应用[J].国际生殖健康/计划生育杂志,2010,29(3):235-238. 被引量:7
  • 8Hosono S, Faruqi AF, Dean FB, et al. Unbiased whole- genome amplification directly from clinical samples. Genome Res,2003, 13(5):954-64.
  • 9Kennett JY, Watson SK, Saprunoff H, et al. Technical demonstration of whole genome array comparative genomic hybridization. Vis Exp, 2008(18):3791-870.
  • 10Panelli S, Damiani G, Espen L, et al. Ligation overcomes terminalunderrepresentation in multiple displacement am- plification of linear DNA. Biotechniques, 2005, 39(2): 174-8.

二级参考文献32

  • 1孙岩,丁兰,王有麒,周宏远,张思仲.一个可能与PKD2基因连锁的常染色体显性多囊肾病家系[J].中华医学遗传学杂志,2005,22(5):554-556. 被引量:3
  • 2梅长林,戴兵.多囊肾病慢性进展的分子发病机制及治疗对策[J].中国实用内科杂志,2007,27(1):53-55. 被引量:10
  • 3Boucher C, Sandford R. Autosomal dominant polycystic kidney disease (ADPKD, MIM 173900, PKD1 and PKD2 genes, protein products known as polycystin - 1 and polycystin -2). Eur J Hum Genet, 2004,12(5) :347-354.
  • 4Burn TC, Connors TD, Dackowski WR, et al. Analysis of the genomic sequence for the autosomal dominant polycystic kidney disease ( PKD1 ) gene predicts the presence of a leucine - rich repeat. The American PKD1 Consortium (APKD1 Consortium). Human Molecular Genetics, 1995,4(4 ) :575-582.
  • 5Hughes J, Ward C J, Peral B, et al. The polycystic kidney disease 1 (PKD1) gene encodes a novel protein with multiple cell recognition domains. Nature Genetics, 1995,10 (2) : 151-160.
  • 6Mochizuki T, Wu G, Hayashi T. et al. PKD2 a gene for polycystic kidney disease that encodes an integral membrane protein. Science ( New york, NY, 1996,272(5266) : 1339 - 1342.
  • 7Handyside AH, Kontogianni EH, Hardy K, et al. Pregnancies from biopsied human preimplantation embryos sexed by Y - specific DNA amplification. Nature, 1990,344 ( 6268 ) :768-770.
  • 8Verlinsky Y, Cohen J, Munne S, et al. Over a decade of experience with preimplantation genetic diagnosis: a muhicenter report. Fertility and Sterility, 2004,82 ( 2 ) :292-294.
  • 9Verlinsky Y, Rechitsky S, Verlinsky O, et al. Preimplantation genetic diagnosis for polycystic kidney disease. Fertility and Sterility, 2004,82(4) :926-929.
  • 10De - Rycke M, Georgiou I, Sermon K, et al. PGD for autosomal dominant polycystic kidney disease type 1. Molecular Human Reproduction,2005,11 ( 1 ) :65 -71.

共引文献6

同被引文献80

  • 1Sun G, Kaushal R, Pal P, et al. Whole genome amplification: relative efficiencies of the current methods. Leg Med(Tokyo), 2005,7 : 279-286.
  • 2Lizardi PM, Huang X, Zhu Z, et al. Mutation detection and single-molecule counting using isothermal rolling-circle amplification. Nat Genet, 1998,19 - 225-232.
  • 3Dean FB, Hosono S, Fang L, et al. Comprehensive human genome amplification using multiple displacement amplification. Proc Natl Acad Sci U S A,2002,99:5261-5266.
  • 4Spits C, Le Caignec C, De Rycke M, et al. Optimization and evaluation of single-cell whole-genome multiple displacement amplification. Hum Mutat, 2006,27:496-503.
  • 5Paez JG, Lin M, Beroukhim R, et al. Genome coverage and sequence fidelity of phi29 polymerase-based multiple stranddisplacement whole genome amplification. Nucleic Acids Res, 2004,18,32: 71.
  • 6Ivanov PL, Fomichev AA. Whole-genome amplification by MDA to improve sensitivity of forensic expert examination of chromosomal DNA. Sud Med Ekspert, 2008,51 : 16-18.
  • 7Burlet P, Frydman N, Gigarel N, et al. Multiple displacement amplification improves PGD for fragile X syndrome. Mol Hum Reprod,2006,12: 647-652.
  • 8Ling ], Zhuang G, Tazon-Vega B, et al. Evaluation of genome coverage and fidelity of multiple displacement amplification from single cells by SNP array. Mol Hum Reprod,2009,15:739-747.
  • 9Kennett JY, Watson SK, Saprunoff H, et al. Technical demonstration of whole genome array comparative genomie hybridization. J Vis Exp, 2008,18 : 3791-3870.
  • 10Panelli S, Damiani G, Espen L, et al. Ligation overcomes terminalunderrepresentation in multiple displacement amplifica- tion of linear DNA. Biotechniques, 2005,39 t 174-178.

引证文献6

二级引证文献8

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部