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Limited gene flow and partial isolation phylogeography of Himalayan snowcock Tetraogallus himalayensis based on part mitochondrial D-loop sequences 被引量:5

Limited gene flow and partial isolation phylogeography of Himalayan snowcock Tetraogallus himalayensis based on part mitochondrial D-loop sequences
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摘要 Himalayan snowcock Tetraogallus himalayensis are distributed in alpine and subalpine areas in China. We used mi- tochondrial DNA control-region data to investigate the origin and past demographic change in sixty-seven Himalayan snowcock T. himalayensis. The fragments of 1155 nucleotides from the control region of mitochondrial DNA were sequenced, and 57 poly- morphic positions defined 37 haplotypes. A high level of genetic diversity was detected in all populations sampled and may be associated isolation of the mountains and habitat fragmentation and deterioration from Quaternary glaciations. In the phylogenetic tree, all haplotypes grouped into four groups: clade A (Kunlun Mountains clade), clade B (Northern Qinghai-Tibetan Plateau clade), clade C (Tianshan Mountains clade) and clade D (Kalakunlun Mountains clade). We found a low level of gene flow and significant genetic differentiation among all populations. Based on divergence time we suggest that the divergence of Himalayan snowcock occurred in the middle Pleistocene inter-glaciation, and expansion occurred in the glaciation. Analysis of mtDNA D-loop sequences confirmed demographic population expansion, as did our non-significant mismatch distribution analysis. In conclusion, limited gene flow and a pattern of partial isolation phylogeographic was found in geographic populations of T. hima- layansis based on the analysis on mtDNA D-loop sequences [Current Zoology 57 (6): 758-767, 2011].
出处 《Current Zoology》 SCIE CAS CSCD 北大核心 2011年第6期758-767,共10页 动物学报(英文版)
基金 Acknowledgments Financial support was provided by the National Natural Science Foundation of China (No. 30530130), Dr Start-up Fund Research of Qiongzhou Univer- sity (No. QYXB201009) and the Co-operation Fund Between University and Locality, Sanya (No. 2010YD22) for funding this research.
关键词 Tetraogallus himalayensis Mitochondrial DNA control-region PHYLOGEOGRAPHY 线粒体DNA控制区 D-loop序列 高山雪鸡 喜马拉雅 基因流动 系统地理学 分隔 遗传多样性检测
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