期刊文献+

运用聚类分析与Google Maps于大量物种出现记录之研究 被引量:2

Applying cluster analysis and Google Maps in the study of large-scale species occurrence data
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摘要 物种出现记录包含博物馆动物标本、植物标本、生态调查与物种观察等资料。在台湾生物多样性信息机构(Taiwan Biodiversity Information Facility,TaiBIF)物种出现记录整合平台中,已整合台湾26个数据集,包含超过150万笔物种出现记录,其中约有85%的数据具有地理信息。我们利用数据库中所汇整的鲤科数据,包括11个数据集、超过8,800笔出现记录数据,利用网格式、切割式与密度式3种聚类分析算法分别绘制出不同的空间可视化结果,藉此解决大量物种出现记录于Google Maps上呈现效能与可视化不佳之问题。同时我们也探讨了3种聚类分析法之结果与鲤科的专家意见范围地图(expertopinion range maps)比对的差异。期望透过本研究可快速且有效地呈现物种分布资料,进而帮助研究者挖掘出大量数据所隐含的知识,并为生态保育提供重要参考。 The primary species occurrence data include the data on animal and plant specimens in museums and herbaria,as well as species observations.TaiBIF(Taiwan Biodiversity Information Facility) data portal has integrated 26 datasets so far,resulting in more than 1.5 million species occurrence data;85% of them are geo-referenced.This study utilizes more than 8,800 Cyprinidae occurrence data from 11 datasets and uses three different types of clustering algorithms-grid-based,partition-based,and density-based-to produce different spatial visualization results.It aims to resolve the problems of efficacy and poor visualization when large scales of species occurrence data are presented in Google Maps.The study also explores the compara-tive differences between the results obtained from the three clustering algorithms and the expert opinion range maps of Cyprinidae.It hopes to identify a quick and efficient way to present species distribution data,in turn help researchers to extract knowledge from large amount of data so that the knowledge can be tapped as important reference for ecological conservation efforts.
出处 《生物多样性》 CAS CSCD 北大核心 2012年第1期76-85,共10页 Biodiversity Science
基金 台湾科技部门支助之TaiBIF维运计划
关键词 物种出现记录 聚类分析 生物多样性信息学 可视性分析 species occurrence data cluster analysis biodiversity informatics visualization
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参考文献21

  • 1Chapman AD (2005) Uses of primary species-occurrence data, version 1.0, Global Biodiversity Information Facility.
  • 2ChenIS(陈义雄),FangLS(方力行)(1999).The Freshwater and Estuarine Fishes of Taiwan (台湾淡水及河口鱼类志).Museum of Marine Biology and Aquarium, Taiwan. (in Chinese).
  • 3Encyclopedia of Life (2011) Retrieved from http://www. eol.org, Accessed 2011-07-01.
  • 4Ester M, Kriegel HP, Sander 1, Xu X (1998) Clustering for mining in large spatial databases. Special Issue on Data Mining. Kl-Iournel; ScienTec Publishing, I, 1-7.
  • 5Flemons P, Guralnick R. Krieger 1, Ranipeta A, Neufeld D (2007) A web-based GIS tool for exploring the world's biodiversity: The Global Biodiversity Information Facility Mapping and Analysis Portal Application (GBIF-MAPA). Ecological Informatics, 2(1), 49-60.
  • 6GBIF Data Portal (2011) Retrieved from http://data.gbif.org, Accessed 2011-07-01.
  • 7Han 1. Kamber M (2006) Data Mining: Concepts and Techniques, 2nd edn. Morgan Kaufmann Publishers, Amsterdam.
  • 8Hijmans RI. Spooner DM (2001) Geographic distribution of wild potato species. American Journal of Botany. 88. 2101-2112.
  • 9Hill AW. Guralnick RP. Flemons p. Beaman R. Wieczorek J. Ranipeta A. Chavan V. Remsen D (2009) Location. location. location: utilizing pipelines and services to more effectively georeference the world's biodiversity data. BMC Bioiniotmetics, 10. S3.
  • 10Hill AW. Otegui J. Arifio AH. Guralnick RP (2010) GBIF Position Paper on Future Directions and Recommendations for Enhancing Fitness-for-Use Across the GBIF Network. version 1.0. Copenhagen: Global Biodiversity Information Facility. 25.

二级参考文献13

  • 1Chapman AD (2005) Uses of Primary Species-Occurrence Data, version 1.0. Report for the Global Biodiversity Information Facility, Copenhagen.
  • 2Froese R, Pauly D (2000) FishBase 2000: Concepts, Design and Data Sources. ICLARM, Los Banos, Laguna, Philippines. 344 p.
  • 3Jones MB, Schildhauer MP, Reichman OJ (2006) The new bioinformatics: integrating ecological data from the gene to the biosphere. In: Annual Review of Ecology, Evolution and Systematies, 37, 519-544.
  • 4Shao KT(邵广昭)(2006) Biodiversity informatics and the integration of Taiwan and global information. In: Teaching Materials on Biodiversity-Introduction to Biodiversity (生物多样性教材-生物多样性概论)(ed.Chou CH(周昌弘)),pp.25-40.Pioneer Project Promotion Office for Biodiversity Personnel Training, Ministry of Education, Taipei.
  • 5Shao KT, Lin YC, Lin HH (2007a) Linking the Taiwan fish database to the global database. Data Science Journal, 6, 164-171.
  • 6Shao KT, Peng CI, Yen E, Lai KC, Wang MC, Lin YC, Lee H, Yang JL, Chen XY (2007b) Integration of biodiversity database in Taiwan and linkage to global databases. Data Science Journal, 6, 2-10.
  • 7Shao KT, Lai KC, Lin YC, Lee H (2007c) Progress and impediment of the integration of biodiversity database. In: Handbook of Open and Free: New Enterprise in the Information Age - An International Workshop, pp. 17-18. Institute of Information Science, Academia Sinica, Taipei.
  • 8Shao KT, Huang SC, Chen S, Lin YC, Lai KC, Ko BCJ, Chen LS, Yang AJ (2008) Establishing a Taiwan Biodiversity Information Network and Its Integration with Germplasm Databanks. AFEC-ATCWG Workshop (2008) Capacity Building for Risk Management Systems on Genetic Resources, pp. 71-78. Hsin-Hua, Taiwan.
  • 9Shao KT(邵广昭),Lai KC(赖昆祺),Lin YC(林永昌),Ko CJ(柯智仁),Chen LS(陈丽西),Lee H(李瀚),Lin HH(林欣桦)(2008a)Integration of TELDAP's biodiversity data bases and linkage to global databases. In: Proceedings of Insect and Mite Resource Management and Application Symposium(昆虫与螨蜱资源之管理与应用研讨会专刊)(eds Huang KW(黄坤伟),Chan ML(詹美铃)),pp.283-289. Museum of Natural Science, Taichung.
  • 10Shao KT(邵广昭),Lee H(李瀚),Lin YC(林永昌)(2008b)Establishing Taiwan Species Checklist-TaiBNET. In: 2008 Taiwan Species Diversity. I. Research and Status (2008 台湾物种多样性I.研究现况),283-289.Forestry Bureau,Council of Agriculture and Biodiversity Research Center, Academia Sinica, Taipei.

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