Analysis of Gene Differential Expression of Setcreasea purpurea Boom under Copper Stress by cDNA-AFLP

利用cDNA-AFLP分析铜胁迫下紫鸭跖草基因差异表达(英文)

[Objective] The aim was to explore biological function of related genes in Setcreasea purpurea Boom under copper stress and to study the mechanism of its copper-resistance from standpoint of molecular biology in order to solve the problem of copper pollution. [Method] Setcreasea purpurea Boom was taken as experimental material which enjoys enrichment ability to cupric ion. About 90 fragments of differential expression were obtained by cDNA-AFLP and silver staining technique, among which, 17 fragments were amplified. After purification and identification, sequences of 6 differential fragments were got and used for BLAST X contrast. [Result] Six differential expressed fragments may play roles when Setcreasea purpurea Boom was under copper stress. The homology achieved 49% between differential sequences of E5MG-3 and of Arabidopsis thaliana mRNA （accession numbers： AAM62956.1）, homology was 53% between sequences of E4MB-2 and Solanum tuberosum mRNA （accession numbers： A5A717.1）, and 65% between sequences of E6MG-1 and Colocasia esculenta （L.） Schott mRNA （accession numbers： AAO62313.1）. It can be concluded that differential expressed genes are related to cell signaling, antioxidation, metabolism and protein modification. [Conclusion] The study has laid foundation for further exploration of regulatory network about response of Setcreasea purpurea Boom to copper stress.

[目的]探讨紫鸭趾草在铜胁迫下部分基因的生物学功能,从分子生物学的角度研究植物的耐铜机理,拟通过该研究解决铜污染问题。[方法]以具有铜离子富集能力的植物紫鸭跖草(Setcreasea purpurea Boom)为试验材料。通过cDNA-AFLP以及银染技术,获得90个差异表达片段,扩增得到其中17个片段,经纯化鉴定最终获得6个差异片段的序列,并对其进行了BLASTX比对。[结果]6条差异表达片段可能在铜离子对紫鸭趾草的胁迫中产生作用。其中编号为E5MG-3的差异序列与拟南芥mRNA序列(登录号为AAM62956.1)同源性达49%;E4MB-2与马铃薯mRNA序列(登录号为A5A7I7.1)同源性达53%;E6MG-1与芋mRNA序列(登录号AAO62313.1)同源性达65%。由此推测差异表达基因与细胞信号传导、抗氧化、新陈代谢以及蛋白质修饰等有关。[结论]该研究为进一步揭示紫鸭趾草铜胁迫响应的调控网络奠定基础。