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多配体蛋白聚糖4是糖尿病肾病的候选基因 被引量:2

Syndecan-4 is a candidate gene for diabetic nephropathy
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摘要 目的在2型糖尿病肾病(DN)白蛋白尿易感基因定位的基础上,进一步筛选白蛋白尿易感基因位点(UA-1)区域附近的候选基因。方法提取20周龄雄性KK/Ta(n=3)和BALB/c(n=2)小鼠肾脏总RNA,应用Affymetrix Murine GenomeU74Av2基因芯片检测肾脏基因表达谱。选择UA-1区域的差异表达基因多配体蛋白聚糖4(syndecan-4),竞争性RT-PCR验证基因芯片的结果。提取KK/Ta、BALB/c小鼠的基因组DNA,进行syndecan.4基因编码区和启动子区域的序列分析。结果在2型糖尿病KK/Ta小鼠UA-1区域附近存在着约10个差异表达基因。其中syndecan-4在20周龄KK/Ta小鼠肾脏中的表达上调,为BALB/c小鼠的26.1倍。在syndecan.4基因编码区存在2个基因多态性,分别为A93C和T216C多态性,2者均为同义突变。在syndecan-4基因启动子区域存在3个基因多态性,分别为-T263C、-T396C与-G669A多态性。TATA框位于转录起始位点上游321bp处,-T263C处恰好为转录因子Clox的结合位点。结论syndecan-4基因位于2型糖尿病UA-1附近区域,在20周龄KK/Ta小鼠肾脏中的表达明显上调,是DN的候选基因。syndecan-4启动子处的基因多态性可能为其差异表达的原因。 Objective To identify the candidate genes in the vicinity of a susceptibility locus (urinary albumin 1, UA-1) contributing to the development of albuminuria in type 2 diabetic KK/Ta mice. Methods Total RNA was extracted from the kidneys of KK/Ta (n=3) and BALB/c (n=2) mice at 20 weeks of age. The gene expression profile in kidney was investigated using the Affymetrix Murine Genome U74Av2 array. Competitive RT-PCR was used to confirm the differential expression of syndecan-4 which located in the vicinity of UA-1. Genome DNA was extracted from KK/Ta and BALB/c mice. DNA sequence analysis of the coding and promotor region of syndecan-4 gene was conducted. Results In the vicinity of the susceptibility locus (UA-1) contributing to the development of albuminuria in type 2 diabetic KK/Ta mice, 10 candidate genes that showed differential expression were identified. Among them, the gene expression of syndecan-4in KK/Ta kidneys at 20 weeks of age was up-regulated by 26.1 times of age-matched BALB/c kidneys. Sequence analysis revealed two synonymous polymorphisms in the coding region (A93C and T216C) and three polymorphisms in the promoter region (-T263C, -T396C and -G669A) of the syndecan-4 gene. The TATA box was found at 321 bp upstream from the transcription start site, and the T263C polymorphism was located in the binding site of transcription factor Clox. Conclusions Syndecan-4 gene is mapped in the vicinity of the susceptibility locus contributing to the development of albuminuria in type 2 diabetes. The gene expression of syndecan-4 in KK/Ta kidneys is up-regulated than that in age-matched BALB/c kidneys at 20 weeks of age. Thus syndeean-4 may be one of the potential candidate genes responsible for diabetic nephropathy. Sequence differences in the promoter region influence the expression levels of syndecan-4 genes in KK/Ta kidneys.
出处 《中华肾脏病杂志》 CAS CSCD 北大核心 2012年第4期312-317,共6页 Chinese Journal of Nephrology
基金 国家自然科学基金(30700369) 教育部留学回国人员科研启动基金(教外司留[2006]331号) 辽宁省教育厅科学技术研究项目(L2010658) 沈阳市科技计划项目(F11-264-1-38)
关键词 糖尿病肾病 多态性 单核苷酸 候选基因 KK/Ta小鼠 多配体 蛋白聚糖4 Diabetic nephropathies Polymorphism, single nucleotide Candidate gene KK/Ta mice Syndecan-4
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参考文献20

  • 1Gray SP,Cooper ME. Diabetic nephropathy in 2010:Alleviating the burden of diabetic nephropathy[J].Nat Rev Nephrol,2011.71-73.
  • 2Doria A. Genetics of diabetes complications[J].Current Diabetes Reports,2010.467-475.doi:10.1007/s11892-010-0147-x.
  • 3Brorsson C,Pociot F. Genetics of diabetic nephropathy in diverse ethnic groups[J].Contributions to Nephrology,2011.8-18.
  • 4Akagiri S,Naito Y,Ichikawa H. A mouse model of metabolic syndrome:Increase in visceral adipose tissue precedes the development of fatty liver and insulin resistance in high-fat diet-fed male KK/Ta mice[J].Journal of Clinical Biochemistry and Nutrition,2008.150-157.
  • 5Tomino Y,Tanimoto M,Shike T. Pathogenesis and treatment of type 2 diabetic nephropathy:lessons from the spontaneous KK/Ta mouse model[J].Curr Diabetes Rev,2005.281-286.
  • 6刘天承,邱长春,周文郁.多基因疾病相关基因定位的研究策略[J].中国科学(C辑),2003,33(3):193-201. 被引量:4
  • 7Multhaupt HA,Yoneda A,Whiteford JR. Syndecan signaling:when,where and why[J].Journal of Physiology and Pharmacology,2009,(Suppl 4):31-38.
  • 8Woods A,Couchman JR. Syndecan-4 and focal adhesion function[J].Current Opinion in Cell Biology,2001,(5):578-583.doi:10.1016/S0955-0674(00)00254-4.
  • 9Simons M,Horowitz A. Syndecan-4-mediated signalling[J].Cellular Signalling,2001.855-862.doi:10.1016/S0898-6568(01)00190-5.
  • 10Ikesue M,Matsui Y,Ohta D. Syndeean-4 deficiency limits neointimal formation after vascular injury by regulating vascular smooth muscle cell proliferation and vascular progenitor cell mobilization[J].Arteriosclerosis,Thrombosis,and Vascular Biology,2011.1066-1074.doi:10.1161/ATVBAHA.110.217703.

二级参考文献68

  • 1Altmueller J, Palmer L J, Fischer G, et al. Genomewide scans of complex human diseases: true linkage is hard to find. Am J Hum Genet, 2001, 69:936--950.
  • 2Risch N J. Searching for genetic determinants in the new millennium. Nature, 2000, 405:847-856.
  • 3Wright A F, Carothers A D, Pirastu M. Population choice in mapping genes for complex diseases. Nat Genet, 1999, 23:397-404.
  • 4Chapman N H, Wijisman E M. Genome screens using linkage disequilibrium tests: optimal marker characteristics and feasibility. Am J Hum Genet, 1998, 63:1872-1885.
  • 5Slatkin M. Linkage disequilium in growing and stable populations. Genetics, 1994, 137:331-336.
  • 6Peltonen L. Positional cloning of disease genes: advantages of genetic isolates. Hum Hered, 2000, 50:66-75.
  • 7Terwilliger J D, Zoellner S, Laan M, et al. Mapping genes through the use of linkage disequilibrium generated by genetic drift:'Drift mapping' in small populations with no demographic expansion. Hum Hered, 1998, 48:138-154.
  • 8Neuman R J, Saccone N L, Holmans P, et al. Clustering methods applied to allele sharing data. Genet Epidemiol, 2000,19(Suppl 1): S57-S63.
  • 9Marth G T, Korf I, Yandell M D, et al. A general approach to single-nucleotide polymorphism discovery. Nat Genet, 1999, 23:452-456.
  • 10Choy Y S, Dabra S L, Hall F, et al. Superiority of denaturing high performance liquid chromatography over single-stranded conformation and conformation-sensitive gel electrophoresis for mutation detection in TSC2. Ann Hum Genet, 1999, 63:383-391.

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