期刊文献+

E.coli和Yeast基因起始与终止密码子邻近序列碱基保守性、关联性的对比研究 被引量:4

The Contrast Study of Base′s Conservative Character and Correlative Character between E.coli and Yeast Gene for Adjacent Sequence of Initiation Codon or Termination Codon
下载PDF
导出
摘要 计算E .coli和Yeast基因起始与终止密码子邻近序列单碱基、相邻双碱基、相邻三碱基的碱基出现概率得出的M1(l)、M2 (l)、M3 (l)值 ,很好地体现了原核生物E .coli和真核生物Yeast翻译起始区域的显著差异 ;矩阵P的本征值之和 ,可作为衡量不同生物基因碱基保守性、关联性强弱程度的一个指标 . The values of M 1(l)、M 2(l) and M 3(l) are obtained by calculating probability of single base, neighbor 2 bases and 3 bases near initiation codon and termination codon. The remarkable difference between prokaryote E.coli and eukaryote Yeast at translation region is reflected. The sum of matrix P eigenvalues can be used as a index of measuring degree of conservative character and correlative character of different living things′ genes.
出处 《内蒙古大学学报(自然科学版)》 CAS CSCD 2000年第2期164-167,共4页 Journal of Inner Mongolia University:Natural Science Edition
基金 国家自然科学基金
关键词 基因 保守性 关联性 起始密码子 碱基 大肠杆菌 E.coli gene Yeast gene conservative character correlative character martix eigenvalue
  • 相关文献

参考文献2

二级参考文献7

  • 1Luo L F,J Theor Biol,1992年,157卷,83页
  • 2Luo L F,J Theor Biol,1988年,130卷,351页
  • 3Zhang C T,J Theor Biol,187卷,297页
  • 4李前忠,内蒙古大学学报,1999年,30卷,1期,41页
  • 5Li Hong,J Theor Boil,1996年,181卷,111页
  • 6Luo L F,J Theor Biol,1988年,130卷,351页
  • 7李前忠.核酸序列的矩阵表示[J].内蒙古大学学报(自然科学版),1999,30(1):41-44. 被引量:3

共引文献5

同被引文献32

  • 1Grant H J, Oliver R, Peter A S. Transterm: A database of mRNAs and translational control elements[J]. Nucleic Acids Res,2002, 30(1) :310-311.
  • 2Chen Lingling, Zhang Chunting. Seven GC-rich microbial genomes adopt similar codon usage patterns regardless of their phylogenetic lineages[J]. Biochemical and Biophysical Research Communications, 2003,(306):310~317
  • 3Sharp P M, Cowe E. Synonymous codon usage in Saccharomyces cerevisiae[J]. Yeast, 1991,7:657~678
  • 4Pamela Chavez, Croocker Yoshihiko, Sako Aritsune Uchida. Purification and characterization of an intracellular heat-stable proteinase (pernilase) from the marine hyperthermophilic archaeon Aeropyrum pernix K1[J].Extremophiles, 1999,(3):3~9
  • 5Yoshihiko Sakoa, Pamela Chavez, Croockera Yuzaburo Ishida. An extremely heat-stable extracellular proteinase (aeropyrolysin) from the hyperthermophilic archaeon Aeropyrum pernix K1[J]. FEBS Letters,1997,(415): 329~334
  • 6Nakamura Y, Gojobori T, Ikemura T. Codon usage tabulated from the international DNA sequence databases: Status for the year 2000[J]. Nucl. Acids Res., 2000,28(1): 292~293
  • 7Grant H J, Oliver R, Peter AS, et al. Transterm: A database of mRNAs and translational control elements[J]. Nucleic Acids Res., 2002, 30(1): 310~311
  • 8Huerta A M,Collado-Vides J.Sigma 70 Promoters in Escherichia coli:Specific Transcription in Dense Regions of Overlapping Promoter-like Signals[J].J.Mol.Biol,2003,333(2):261~278.
  • 9Demeler B,Zhou G W.Neural network optimization for E.coli promoter prediction[J].Nucleic Acids Res,1991,19(7):1593~ 1599.
  • 10O'Neill M C.Escherichia coli promoters:neural networks develop distinct descriptions in learning to search for promoters of different spacing classes[J].Nucleic Acids Res,1992,20 (13):3 471~ 3477.

引证文献4

二级引证文献7

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部