期刊文献+

454测序技术在医学昆虫研究中的应用 被引量:1

ADVANCE OF HIGH-THROUGHPUT 454 PYROSEQUENCING TECHNIQUE AND ITS APPLICATION IN MEDICAL ENTOMOLOGY
下载PDF
导出
摘要 医学昆虫是具有医学和经济双重意义的重要媒介生物,严重影响人们生活质量与身体健康。防制技术的进步是基于对其生物学认识(如生态习性、生理特点)的深入,但目前从基因组角度的了解却知之甚少。为此,研究人员采用下一代高通量测序技术从组学角度进行研究,其中454焦磷酸测序技术兼具经济性与读长最长的特点,尤其适合于无参考基因组的非模式医学昆虫应用。本文简介了454测序原理,主要从技术特点、应用范围等角度将其与Solexa测序、基因芯片技术进行比较;综述了近期在医学昆虫领域取得的研究结果,包括抗药性分子机制、虫媒病原体检测、系统发育及分类鉴定、重要生理功能相关转录谱分析等,以期为其在更多媒介生物中的应用提供指导。 Medical insect sincerely influence people life quality and health due to its medical and economic significance. Comprehensive understanding about these insects is crucial to control effectively, but this aspect was very scarce especially at the genomie level. So researchers exploit the next-generation high-throughput sequencing technique to obtain the genomic information, among them 454 pyrosequencing technique possess both economic and long read advantages and is specially used to non-model medical insect without reference genome. This review enclosed the technical theory and feature of 454 sequencing compared with solexa sequencing and microarray in the aspect of utilization and superiority, summarized the recent research result in medical insect including insecticide molecular mechanism, vector borne pathogen detection, phylogeny, transcriptional profile of important physiological function, finally aimed for the guidance of its more wide application in the field.
出处 《寄生虫与医学昆虫学报》 CAS 2012年第2期116-121,共6页 Acta Parasitologica et Medica Entomologica Sinica
关键词 医学昆虫 454焦磷酸测序 基因芯片 高通量 转录组 Medical insect 454 pyrosequencing Microarray High-throughput Transcriptomics
  • 相关文献

参考文献32

  • 1郝力力,李锐.运用Solexa高通量测序法鉴定日本血吸虫miRNAs[J].浙江农业科学,2011,52(4):937-939. 被引量:1
  • 2滕晓坤,肖华胜.基因芯片与高通量DNA测序技术前景分析[J].中国科学(C辑),2008,38(10):891-899. 被引量:48
  • 3Ahmadian, A. , M. Elm and S. Hober 2006 Pyrosequencing: history, biochemistry and future. Clin. Chim. Acta. , 363 ( 1-2 ) : 83-94.
  • 4Andreotti, R. , A. A. P6rez de Le6n, S. E. Dowd et al. 2010 Assessment of bacterial diversity in the cattle tick Rhipicephalus (Boophilus) microplus through tag-encoded pyrosequencing. BMC Microbiol. , 11 ( 1 ) : 6.
  • 5Bai, X. , P. Mamidala, S. P. Rajarapu et al. 2011 Transcriptomics of the bed bug ( Cimex leetularius ). PLoS One, 6 ( 1 ) : e16336.
  • 6Bishop-Lilly, K. A. , M. J. Turell, K. M. Willner et al. 2010 Arbovirus detection in insect vectors by rapid, high-throughput pyrosequencing. PLoS Negl. Trop. Dis. 4 ( 11 ) : e878.
  • 7Carvalho, R. A. , A. M. Azeredo-Espln, T. T. Tortes et al. 2010 Deep sequencing of New World screw-worm transcripts to discover genes involved in inseetieide resistance. BMC Genomics, 11 : 695.
  • 8Chen, J. W. , L. Wang, X. F. Pang et al. 2006 Genomic resources for the brown planthopper, Nilaparvata lugens Transcriptome pyrosequencing and microarray design. Mol. Genet. Genomics, 275 (4) : 321-329.
  • 9Cristino, A. S., E sequencing of Evolutionarily ( Dictyoptera, D. Tanaka, M. Rubio et al. 2011 Deep organ- and stage-specific microRNAs in the Basal Insect Blattella germanica ( L. ) Blattellidae). PLoS One, 6 (4) : e19350.
  • 10David, J. P. , E. Coissac, C. Melodelima et al. 2010 Transcriptome response to pollutants and insecticides in the dengue vector Aedes aegypti using next-generation sequencing technology. BMC Genomics, 11 : 216.

二级参考文献8

  • 1张瑰红,施达仁,梁晓曼,侯景辉,康苏娅,朱卫东,李晓兵,邵云,陈丽荣,周燕.显色原位杂交和免疫组织化学检测乳腺癌HER2/neu基因状况和蛋白表达的对照性研究[J].中华病理学杂志,2006,35(10):580-583. 被引量:29
  • 2周晓钟.我国血吸虫病的分布及防治[J].安徽农业科学,2007,35(12):3766-3768. 被引量:11
  • 3Zhou Y,Zheng H,Chen Y,et al.Schistosoma japonicum genome sequencing and functional analysis consortium.The Schistosoma japonicum genome reveals features of host2parasite interplay[J].Nature,2009,460 (7253):345-351.
  • 4Schuster S C.Next-generation sequencing transforms today's biology[J].Nat Methods,2008,5 (1):16-18.
  • 5Morin R D,Connor M D,Griffith M,et al.Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells[J].Genome Research,2008,18 (4):610-621.
  • 6Cummins J M,He Y,Leary R J,et al.The colorectal microRNAome[J].Proceedings of the National Academy of Sciences of the United States of America,2006,103 (10):3687-3692.
  • 7He L,Hannon G J.MicroRNAs:small RNAs with a big role in gene regulation[J].Nature Reviews,2004,5 (7):522-531.
  • 8李怀宝.日本血吸虫病的综合防治与公共卫生安全[J].畜牧与饲料科学,2010,31(1):160-162. 被引量:4

共引文献47

同被引文献7

引证文献1

二级引证文献18

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部