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A Study of Genetic Polymorphism of Cassava Germplasms and ISSR Molecular Markers

A Study of Genetic Polymorphism of Cassava Germplasms and ISSR Molecular Markers
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摘要 [ Objective] This study aimed to analyze the genetic potymorphism of 39 cassava varieties (lines) preserved in Guangxi Zhuang Autonomous Region Research Institute for Subtropical Crops. [ Method ] ISSR primers with good polymorphisms and amplification effects in cassava were selected for PCR amplification of 39 cassava germplasms, statistics and analysis of the amplified bands were conducted. In addition, cluster analysis was conducted by using UPGMA method based on the genetic similarity among cassava varieties (lines). [ Result] Ten pairs of ISSR primers were selected. A total of 70 clear electrophoretic bands were amplified, each pair of primers had amplified 3 -9 electrophoretic bands, with an average of 7, and the length of amplified bands ranged from 150 to 2,000 bp; cluster analysis showed that 39 cassava varieties (lines) were clustered into two categories by the similarity coefficient of 0.67 ; in addition, the genetic distance among cassava was very narrow, with genetic similarity coefficients ranging between 0.80 and 1.00. [ Conclusion] This study laid foundation for breeding of high- cmalitv cassava in China. [ Objective] This study aimed to analyze the genetic potymorphism of 39 cassava varieties (lines) preserved in Guangxi Zhuang Autonomous Region Research Institute for Subtropical Crops. [ Method ] ISSR primers with good polymorphisms and amplification effects in cassava were selected for PCR amplification of 39 cassava germplasms, statistics and analysis of the amplified bands were conducted. In addition, cluster analysis was conducted by using UPGMA method based on the genetic similarity among cassava varieties (lines). [ Result] Ten pairs of ISSR primers were selected. A total of 70 clear electrophoretic bands were amplified, each pair of primers had amplified 3 -9 electrophoretic bands, with an average of 7, and the length of amplified bands ranged from 150 to 2,000 bp; cluster analysis showed that 39 cassava varieties (lines) were clustered into two categories by the similarity coefficient of 0.67 ; in addition, the genetic distance among cassava was very narrow, with genetic similarity coefficients ranging between 0.80 and 1.00. [ Conclusion] This study laid foundation for breeding of high- cmalitv cassava in China.
出处 《Agricultural Biotechnology》 CAS 2012年第1期8-11,共4页 农业生物技术(英文版)
基金 Supported by Special Fund for Basic Scientific Research Operation Expenses of Nonprofit Research Institutes Directly Under Guangxi Zhuang Autonomous Region (200803) Guangxi Scientific Research and Technological Development Project (Chairman Fund 09203-03)
关键词 CASSAVA 1SSR Genetic polymorphism Cluster analysis Cassava 1SSR Genetic polymorphism Cluster analysis
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