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禾本科植物中调控产率基因GS5的进化 被引量：1

Evolutionary Analysis of Gene GS5 with Regulation Yield in Grass
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摘要 GS5作为正调控水稻粒径大小的基因,对于水稻的产率调控具有十分重要的作用,然而关于GS5基因家族的进化还不是很清楚。通过对水稻中的GS5基因和水稻、高粱、玉米、二叶短柄草、谷子的全基因组序列分别进行比较分析,发现在五个禾本科植物中均有调控粒径大小的基因存在;共线性分析揭示基因倍增有利于GS5基因家族的扩增;另外,系统发育分析表明其家族中有些基因的进化速率明显较快,这将使得一些基因会较快变异为新的基因序列。 GS5 as a positive regulatory gene of the rice particle size has a very Important rote in me regulation of rioe yield. However, GS5 gene family evolution is not very clear. This paper has shown that there exists the gene regulating particle size respetively in the five grasses, including rite, sorghum, Zea mays, Braehypodium distachyon and Setaria italiea. This finding was got through the comparision between GS5 gene of rice and the whole genome sequences of those five grasses ; eollinearity analysis found that gene duplication is benifieial to the amplieation of GS5 gene family ;In addition ,phylogenetie analysis showed that some gene in the family has a signiiieantly faster rate, which will make rapid genes mutate into a new gene sequress.
作者 张帅 王金朋 张宪 金殿川
机构地区 河北联合大学理学院 河北联合大学生命科学学院
出处 《河北联合大学学报（自然科学版）》 CAS 2012年第4期65-68,共4页 Journal of Hebei Polytechnic University:Social Science Edition
基金 国家自然科学基金项目(NO.31100913) 河北省科学技术指导项目(NO.Z2011126)
关键词 GS5基因家族 系统进化树 全基因组倍增 基因共线性 GS5 Gene Family Phylogenetic Tree Whole Genome Duplication Gene Synteny
分类号 S511 [农业科学—作物学]
  • 相关文献

参考文献11

  • 1王凤梅.水稻功能基因组学研究[J].生物技术通报,2007,23(1):10-13. 被引量：5
  • 2Li Y. B, Fan C. C et al. Natural variation in GS5 plays an important role in regulating grain size and yield in riee[ J]. Nature ,2011.
  • 3Ghaemmaghami, S. , Huh, W. K. , Bower, K. , Howson, R. W. , Belle,A. , Dephoure, N. , OShea, E. K. & Weissman, J. S. ( 2003 ) Global analysis of protein expression in yeast, Nature. 425,737-41.
  • 4Yu, J. Wang, J. Lin, W. Li, W. Zhang, B. Hu, W. , et al. (2005) The Genomes of Oryza sativa : a history of duplications, PLoS Biol. 3, e38.
  • 5Wang, X. , Shi, X. , Li, Z. , Zhu, Q. , Kong, L. , Tang, W. , Ge, S. & Luo, J. (2006) Statistical inference of chromosomal homology based on gene co- linearity and applications to Arabidopsis and rice, BMC Bioinformatics. 7,447.
  • 6Paterson, A. H. , Bowers, J. E. , Bruggmann, et al. (2009) The Sorghum bicolor genome and the diversification of grasses, Nature. 457,551-6.
  • 7Wang,X. ,Gowik ,U. ,Tang,H. ,Bowcrs,J. E. ,Westhoff,P. & Paterson,A. H. (2009) Comparative genomie analysis of C4 photosynthetic pathway evolution in grasses, Genome Biol. 10, R68.
  • 8Milind B. Ratnaparkhe,X. W. , J ingping Li, Rosana O. Compton, Lisa K. Rainville, Cornelia Lemke, Changsoo Kim, Haibao Tang, Andrew H. Pater- son. (2011 ) Comparative analysis of peanut NBS - LRR gene clusters suggests evolutionary innovation among duplicated domains and erosion of gene mierosynteny, New Phytologist. 192,164-178.
  • 9Wang, X. , Shi, X. , Hao, B. , Ce, S. & Luo, J. (2005) Duplication and DNA segmental loss in the rice gcnome : implications for diploidization, New Phytol. 165,937-46.
  • 10Paterson A H, Bowers J E, et al. Ancient polyploidization predating divergence of the cereals and its consequences for comparative genomics [ C]. Proc Natl Acad Sci U S A,2004,101 (26) :9903-8.

二级参考文献11

共引文献4

同被引文献15

  • 1Yongzhong Xing,Qifa Zhang.Genetic and Molecular Bases of Rice Yield[J]. Annual Review of Plant Biology . 2010
  • 2Wan, Xiangyuan,Weng, Jianfeng,Zhai, Huqu,Wang, Jiankang,Lei, Cailin,Liu, Xiaolu,Guo, Tao,Jiang, Ling,Su, Ning,Wan, Jianmin.Quantitative Trait Loci (QTL) Analysis For Rice Grain Width and Fine Mapping of an Identified QTL Allele gw-5 in a Recombination Hotspot Region on Chromosome 5[J]. Genetics . 2008 (4)
  • 3Song Xian-Jun,Huang Wei,Shi Min,Zhu Mei-Zhen,Lin Hong-Xuan.A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase. Nature Genetics . 2007
  • 4Fan C,Xing Y,Mao H et al.GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein. Theoretical and Applied Genetics . 2006
  • 5Xiaojun Zhang,Jianfei Wang,Ji Huang.Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice. Proceedings of the National Academy of Sciences of the United States of America . 2012
  • 6Shaokui Wang,Kun Wu,Qingbo Yuan.Control of grain size, shape and quality by OsSPL16 in rice. Nature Genetics . 2012
  • 7Yibo Li,Chuchuan Fan,Yongzhong Xing,Yunhe Jiang,Lijun Luo,Liang Sun,Di Shao,Chunjue Xu,Xianghua Li,Jinghua Xiao,Yuqing He,Qifa Zhang.Natural variation in GS5 plays an important role in regulating grain size and yield in rice. Nature Genetics . 2011
  • 8Y. Xing,Y. Tan,J. Hua,X. Sun,C. Xu,Q. Zhang.??Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice(J)Theoretical and Applied Genetics . 2002 (2-3)
  • 9Mao H,Sun S,Yao J,et al.Linking differential domain functions of the GS3protein to natural variation of grain size in rice. Proceedings of the National Academy of Sciences of the United States of America . 2010
  • 10Ayahiko Shomura,Takeshi Izawa,Kaworu Ebana,Takeshi Ebitani,Hiromi Kanegae,Saeko Konishi,Masahiro Yano.Deletion in a gene associated with grain size increased yields during rice domestication. Nature Genetics . 2008

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河北联合大学学报（自然科学版）
2012年 第4期

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