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Chemical proteomics:terra incognita for novel drug target profiling

Chemical proteomics:terra incognita for novel drug target profiling
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摘要 The growing demand for new therapeutic strategies in the medical and pharmaceutic fields has resulted in a pressing need for novel druggable targets.Paradoxically,however,the targets of certain drugs that are already widely used in clinical practice have largely not been annotated.Because the pharmacologic effects of a drug can only be appreciated when its interactions with cellular components are clearly delineated,an integrated deconvolution of drug-target interactions for each drug is necessary.The emerging field of chemical proteomics represents a powerful mass spectrometry(MS)-based affinity chromatography approach for identifying proteome-wide small molecule-protein interactions and mapping these interactions to signaling and metabolic pathways.This technique could comprehensively characterize drug targets,profile the toxicity of known drugs,and identify possible off-target activities.With the use of this technique,candidate drug molecules could be optimized,and predictable side effects might consequently be avoided.Herein,we provide a holistic overview of the major chemical proteomic approaches and highlight recent advances in this area as well as its potential applications in drug discovery. The growing demand for new therapeutic strategies in the medical and pharmaceutic fields has resulted in a pressing need for novel druggable targets. Paradoxically, however, the targets of certain drugs that are already widely used in clinical practice have largely not been annotated. Because the pharmacologic effects of a drug can only be appreciated when its interactions with cellular components are clearly delineated, an integrated deconvolution of drug-target interactions for each drug is necessary. The emerging field of chemical proteomics represents a powerful mass spectrometry (MS)-based affinity chromatography approach for identifying proteome-wide small molecule-protein interactions and mapping these interactions to signaling and metabolic pathways. This technique could comprehensively characterize drug targets, profile the toxicity of known drugs, and identify possible off-target activities. With the use of this technique, candidate drug molecules could be optimized, and predictable side effects might consequently be avoided. Herein, we provide a holistic overview of the major chemical proteomic approaches and highlight recent advances in this area as well as its potential applications in drug discovery.
出处 《Chinese Journal of Cancer》 SCIE CAS CSCD 2012年第11期507-518,共12页
基金 supported by grants from the National Basic Research Program of China (No.2011CB910703) the National 863 High Tech Foundation (No.2007AA021205) Chinese NSFC (No.81072022)
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  • 1Ito T, Ando H, Suzuki T, et al. Identification of a primary target of thalidomide teratogenicity. Science, 2010,327: 1345-1350.
  • 2Aebersold R, Mann M. Mass spectrometry-based proteomics. Nature, 2003,422:198-207.
  • 3Templin MF, Stoll 0, Schrenk M, et al. Protein microarray tech nology . Trends Biotech nol, 2002,20: 160 -166.
  • 4Veenstra TO. Proteomic approaches in drug discovery. Drug Discov Today, 2007,3:433-440.
  • 5Chaurand P, Stoeckli M, Caprioli RM. Direct profiling of proteins in biological tissue sections by MALDI mass spectrometry. Anal Chem, 1999,71 :5263-5270.
  • 6MacBeath G. Protein microarrays and proteomics. Nat Genet, 2002,32: 526 - 532.
  • 7Gygi SP, Rist B, Gerber SA, et a1. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat Biotechnol, 1999,17:994-999.
  • 8Ross PL, Huang YN, Marchese IN, et al. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics, 2004,3: 1154- 1169.
  • 9Ryan TE, Patterson SO. Proteomics: drug target discovery on an industrial scale. Trends Biotechnol, 2002,20:S45-S51.
  • 10Holly MK, Dear JW, Hu X, et al. Biomarker and drug-target discovery using proteomics in a new rat model of sepsis?induced acute renal failure. Kidney Int, 2006,70:496-506.

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