摘要
采用同源建模技术构建了大鼠γ-氨基丁酸a型受体(GABAaR)模型,并将氨基酸残基β157Tyr和β205Tyr突变为相应的突变受体模型.使用分子对接方法计算了γ-氨基丁酸(GABA)与突变前后受体的相互作用.对接计算结果显示,Tyr突变为Phe后,两种突变受体的对接能量大幅提高,GABA生物活性降低;当Phe的对位引入氟原子后,对接能量与未突变受体相比更低.另外,与β205Tyr突变相比,与配体距离较近的β157Tyr突变,对受体与配体作用的影响更大.
Homology modeling and docking are important technologies in computer-aided drug design, which can explain the interactions between ligands and receptors. In this study, a rat γ-aminobutyric acid a-type receptor(GABAaR) model and its β205Tyr and β157Tyr mutant receptor models were built by homology modeling. The interactions between γ-aminobutyric acid (GABA) and the GABAaR and its mutants were studied by molecular docking, and the result show that the docking energy of the mutant receptors increases significantily and the biological activity of GABA decreases when Tyr changes to Phe; the docking energy becomes lower than that of the original receptor when Tyr changes to 4-F-Phe. In addition, the impact of β157Tyr mutations on the interaction between receptors and whenβ157Tyr is closer to the ligand. ligands is much more striking than that of β205Tyr
出处
《高等学校化学学报》
SCIE
EI
CAS
CSCD
北大核心
2012年第12期2708-2715,共8页
Chemical Journal of Chinese Universities
基金
国家科技部"十二五"支撑项目(批准号:2011BAE06B05)
国家"九七三"计划项目(批准号:2010CB126106)
国家自然科学基金(批准号:21172147和21072216)
上海市教委创新项目(批准号:11ZZ112)资助
关键词
γ-氨基丁酸a型受体
同源建模
氨基酸突变
活性位点
分子对接
γ-Aminobutyric acid a-type receptor
Homology modeling
Amino acid mutation
Active site
Molecular docking