期刊文献+

湖北省HIV-1流行株gag基因序列测定及亚型分析 被引量:3

Subtype and sequence analysis of the gag genes for HIV-1 strains isolated in Hubei province
原文传递
导出
摘要 目的了解湖北省HIV-l感染者流行毒株亚型分布和流行趋势。方法随机采集湖北省HIV-1感染者的抗凝全血标本,分离血浆,提取病毒RNA,用套式聚合酶链反应扩增HIV.1病毒gag基因,并进行序列测定和亚型分析。结果对80份HIV-l感染者的样品进行扩增,得到了62份样品的HIV-1基因片段。共发现7种HIV-1亚型和流行重组株。泰国B’亚型占11.3%(7/62),欧美B亚型占4.8%(3/62),G亚型占4.8%(3/62),CRF07-BC占22.6%(14/62),CRF08-BC占6.5%(4/62),CRF01-AE占48.4%(30/62),CRFl5-01B占1.6%(1/62)。在湖北省发现了CRFl5-01B和G亚型。结论湖北省存在多种HIV-1亚型和流行重组型,CRF01-AE、CRF07.BC两种重组亚型毒株为目前湖北省HIV-1流行优势毒株,应加强对HIV—I毒株亚型变异的监测,及时调整防治策略。 Objective To investigate the characteristic of subtypes and genetic diversity of HIV-1 circulating in Hubei province and its molecular epidemiological linkages with regard to risk factors of viral transmission. Methods plasma samples of 80 diagnosed individuals was characterized. The gene fragments of gag were amplified by reverse transcriptase polymerase chain reaction (RT-PCR) and HIV-1 genotypes were determined based on the nucleotide sequences of gag region. Results Seven HIV-1 group M subtypes or CRF including B, B', G, CRFO1-AE, CRF07-BC, CRF08-BC and CRF15-O1B were identified. CRF01- AE was found to be the most dominant subtype (48.4%) followed by CRFT-BC (22.6%) and B' (12.9%). Conclusion The data from this study indicate the existence of multiple HIV-1 subtypes or CRFs in Hubei province and the surveillance of HIV-1 gene variation should be paid more attention to.
出处 《中华实验和临床病毒学杂志》 CAS CSCD 2012年第6期460-463,共4页 Chinese Journal of Experimental and Clinical Virology
基金 湖北省卫生厅科研基金重点项目(JX3A23 JX2A17)
关键词 HIV-1 基因 序列分析 HIV-1 Genes Sequence analysis
  • 相关文献

参考文献3

  • 1Leitner T,Korber B,Daniels M,et al.Foley B. HIV-1 Subtype and Circulating Recombinant Form (CRF) Reference Sequences[M].Published by:Theoretical Biology and Biophysics Group,Los Alamos National Laboratory,Los Alamos,2005.41-48.
  • 2褚小刚,张险峰,詹发先,汤恒,陈慧萍,彭庭海,龚作炯.湖北省HIV-1分子流行病学研究[J].中华流行病学杂志,2007,28(10):992-995. 被引量:8
  • 3彭国平,詹发先.湖北省AIDS流行态势分析[J].中国艾滋病性病,2004,10(4):263-264. 被引量:22

二级参考文献10

  • 1倪崖,黄云坚,谭卓.HIV亚型特性及其意义[J].国外医学(流行病学.传染病学分册),2004,31(5):269-272. 被引量:8
  • 2彭国平,詹发先.湖北省AIDS流行态势分析[J].中国艾滋病性病,2004,10(4):263-264. 被引量:22
  • 3傅继华,李盛长,张静,刘学真,黄涛,邢辉,邵一鸣.山东省HIV-1感染者分子流行病学研究[J].中华流行病学杂志,2005,26(2):124-127. 被引量:14
  • 4王钊.中国艾滋病流行情况及预防控制工作[J].中国性病艾滋病防治,1998,:1-4.
  • 5“全国艾滋病毒分子流行病学调查及数据库的建立”项目总结(http://jcxgz.most.gov.cn/shownews.asp?newsid=893).
  • 6Thomas Leitner, Bette Korber, Marcus Daniels, et al. HIV 1 subtype and circulating recombinant form (CRF) reference sequences, 2005. Los Alamos National Laboratory, Los Alamos, http://hiv-web.lanl. gov/content/hiv db/REVIEWS/ LEITNER2005/leitner. html.
  • 7Su B, Liu L, Wang F, et al. HIV-1 subtype B' dictates the AIDS epidemic among paid blood donors in the Henan and Hubei provinces of China. AIDS, 2003,17(17) :2515-2520.
  • 8Shao Y, Su L, Sun XH, et al. Molecular epidemiology of HIV infections in China. Int Cont AIDS, 1998,12 : 111-112.
  • 9李允文,邵一鸣,罗小光,苏玲,张流波,陈均,方越,袁健中,张艺,陈惠萍,JosefKostler,HansWolf.湖北省HIV-1流行毒株的基因序列测定和亚型分析[J].中华流行病学杂志,1997,18(4):217-219. 被引量:21
  • 10刘传新,苏生利,傅继华,康殿民.山东省HIV感染者中流动人口感染现况调查[J].中国性病艾滋病防治,2002,8(1):28-30. 被引量:131

共引文献27

同被引文献32

  • 1关琪,王素芬,张卓然,许炜冬,李杰.CRF07-BC亚型HIV的gag-pol区基因序列分析[J].中国艾滋病性病,2006,12(1):7-9. 被引量:1
  • 2Zeng H,Sun Z, Liang S, et al. Emergence of a new H IV type 1 CRF01_AE variant in Guangxi,Southern China [J]. AIDS Res Hum Retroviruses, 2012,28 (10) : 1352-6.
  • 3Chook JB,Ong LY, Takebe Y, et al. Molecular detection of HIV--1 subtype B,CRF01_AE,CRF33 01B,and newly e- merging recombinant lineages in Malaysia [J]. Am J Trop Med Hyg,2015,92(3) :507-12.
  • 4Chalmet K,Dauwe K,Foquet L,et al. Presence of CXCR4-- using HIV--1 in patients with recently diagnosed infection: correlates and evidence for transmission [J]. J Infect Dis, 2012,205(2) :174-84.
  • 5Li Y, Han Y, Xie J, et al. CRF01_AE subtype is associated with X4 tropism and fast HIV progression in Chinese pa- tients infected through sexual transmission[J]. AIDS, 2014,28 (4) : 521-30.
  • 6Shankarappa R, Margoliek JB, Gange SJ, et al. Consistentviral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection[J]. J Virol,1999,73(12) ~ 10489-502.
  • 7Chen M, Ma Y, Su Y, et al. HIV-1 genetic characteristics and transmitted drug resistance among men who have sex with men in Kunming, China[J]. PLoS One, 2014,9(1):87033.
  • 8Zeng H, Sun Z, Liang S, et al. Emergence of a new HIV type 1 CRF01_AE variant in Guangxi, Southern China [J]. AIDS Res Hum Retroviruses, 2012,28(10):1352-1356.
  • 9Chook JB, Ong LY, Takebe Y, et al. Molecular detection of HIV-1 subtype B, CRF01_AE, CRF33_01B, and newly emerging recombinant lineages in Malaysia [J]. Am J Trop Med Hyg, 2015,92(3):507-512.
  • 10Chalmet K, Dauwe K, Foquet L, et al. Presence of CXCR4-using HIV-1 in patients with recently diagnosed infection: correlates and evidence for transmission [J]. J Infect Dis, 2012,205(2):174-184.

引证文献3

二级引证文献6

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部