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Cloning and Sequence Analysis of E Gene from Chicken Flavivirus Isolate CJD05

Cloning and Sequence Analysis of E Gene from Chicken Flavivirus Isolate CJD05
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摘要 [ Objective] This experiment aimed to find out the origin and genetic evolution relationship of chicken flavivirus (CFV) CJD05 strain in Fujian Province. [Method] A pair of primers were designed and synthesized according to the sequences of E gene from Duck flavivirus (DFV) iso- late BYD-1. E gene of CFV isolate CJD05 was specially amplified and its sequences were analyzed. [Result] The target bar which was cloned from CFV isolate C, JD05 was I 503 bp. Homology analysis was conducted to compare E gene nucleotide sequence of CFV isolate CJD05 with DFV iso- late BYD-I and goose flavivirus (GFV) isolate JS804. Results indicated that isolate nuclectide homologies were 99.2% and 99.3%, and amino acid homologies were 99.0% and 98.6% respectively. [Conclusion] CFV isolate C, JD05, DFV isolate BYD-1 and GFV isolate JS804 were highly homologous. The homology of CFV isolate CJD05 with Tembusu virus (TMUV) was higher than with other arthropod-borne flaviviruses. [ Objective] This experiment aimed to find out the origin and genetic evolution relationship of chicken flavivirus (CFV) CJD05 strain in Fujian Province. [Method] A pair of primers were designed and synthesized according to the sequences of E gene from Duck flavivirus (DFV) iso- late BYD-1. E gene of CFV isolate CJD05 was specially amplified and its sequences were analyzed. [Result] The target bar which was cloned from CFV isolate C, JD05 was I 503 bp. Homology analysis was conducted to compare E gene nucleotide sequence of CFV isolate CJD05 with DFV iso- late BYD-I and goose flavivirus (GFV) isolate JS804. Results indicated that isolate nuclectide homologies were 99.2% and 99.3%, and amino acid homologies were 99.0% and 98.6% respectively. [Conclusion] CFV isolate C, JD05, DFV isolate BYD-1 and GFV isolate JS804 were highly homologous. The homology of CFV isolate CJD05 with Tembusu virus (TMUV) was higher than with other arthropod-borne flaviviruses.
出处 《Animal Husbandry and Feed Science》 CAS 2012年第6期245-246,249,共3页 动物与饲料科学(英文版)
基金 Innovation Team project(STIF-Y02),FuJian Academy of Agriculture Sciences Fujian Scientific Research Institutes of Public Welfare Special Fund(2011R1025-2)
关键词 Chicken flavivirus (CFV) E gene Sequence analysis Chicken flavivirus (CFV) E gene Sequence analysis
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