期刊文献+

两种方法制备模板DNA在PCR-SSCP中的应用研究 被引量:2

Research on Application of PCR-SSCP in Preparation of Sample DNA with Two Methods
原文传递
导出
摘要 目的:比较两种方法(DNA试剂盒提取法和FTA卡法)提取的DNA在PCR—SSCP反中的可靠性。方法:用DNA试剂盒从全血中提取DNA和用NaOH方法从FTA卡中提取DNA后,用分光光度计检测两种方法提取DNA的浓度及纯度,进行PCR反应之后,用2%的琼脂糖凝胶电泳检测其质量,接着进行SSCP检测,观测其效果。两种方法提取的样品相同,进行PCR反应和SSCP检测的条件完全一致。结果:用DNA试剂盒提取法和FTA卡法提取的DNA纯度分别为OD260/280=1.817,OD260/280=1.806。48份贵州荷斯坦奶牛DNA后续PCR反应和SSCP的检测结果表明,两种方法提取的DNA用于PCR反应和SSCP检测其效果没有明显差别,成功率为100%。结论:FTA卡结合DNA较稳定,用NaOH法提取DNA效果可靠且比试剂盒方法简便、快捷、经济,值得推广。 Objective:This study tested the reliability of DNA, which using NaOH method extract from FTA card and kit extraction, in PCR reaction, PCR -SSCP reaction. Method:The concentration and purity of DNA, which extracted in two different methods, was tested by spectrophotometer. Then PCR reaction and PCR - SSCP reaction were proceed and the results were checked up. The samples were the same and the two reactions were proceed in same conditions. Result:The purity of DNA were OD260/280 = 1. 817 and OD260/280 = 1. 806,re- spectively. The results of PCR and PCR - SSCP indicated no difference between them and success rate is 100% in all 48 samples. Conclusion:Therefore, the DNA samples adhered properly to FTA card, it is reliable which using NaOH method extract DNA, and more simple and inexpensive. It's worth to popularize this method.
出处 《生物技术》 CAS CSCD 北大核心 2012年第6期45-47,共3页 Biotechnology
基金 教育部美大项目("影响奶牛产奶性状重要基因SNP检测及其关联性研究" 教外司美[2010]1595号) 贵州省国际合作项目("与牛乳蛋白和乳脂性状相关的重要基因多态性分析及其关联性研究" 黔科合外G字[2009]700108号和[2011]7005号) 浙江大学基本科研业务费专项资金(2011KYJD0446)资助
关键词 NaOH方法 FTA卡 提取DNA 血样保存 PCR-SSCP NaOH method FTA card extract DNA blood preserve PCR -SSCP
  • 相关文献

参考文献11

  • 1付素兰,刘景武,任天红,王国文.FTA卡在模板DNA制备中的应用研究[J].中国卫生检验杂志,2008,18(6):1124-1125. 被引量:9
  • 2Bereczky S,Martensson A,Gil J,A.Farnert. Short report:rapid DNA extraction from archive blood spots on filter for genotyping of Plasmodium falciparum[J].American Journal of Tropical Medicine and Hygiene,2005.249-251.
  • 3Huang S,Zhou X,Ren Z. Detection of β-thalassemia mutation in the Chinese using amplified DNA from dried blood specimens[J].Human Genetics,1990.129-131.
  • 4Panteleeff D,John G,Nduati G,Mbori-Ngacha D. Rapid method for screening dried blood samples on filter paper for diagnostic PCR using filter paper and Chelex-100[J].Molecular Pathology,1998.215-217.
  • 5Zhou H,Hickford J,Fang Q. A two-step procedure for extracting genomic DNA from dried blood spots on filter paper for polymerase chain reaction amplification[J].Analytical Biochemistry,2006.159-161.
  • 6徐飞,成述儒,罗玉柱.FTA卡和普通定性滤纸提取DNA方法研究[J].生物技术通报,2011,27(11):221-224. 被引量:4
  • 7C.Régnier,O.Gargominy,G,Falkner. Foot mucus stored on FTA card is a reliable and non-invasive source of DNA for genetics studies in mollusks[J].Conservation Genet Resour,2011.377-382.
  • 8Andrew M.Borman,Mark Fraser,Christopher J. An improved protocol for the preparation of total genomic DNA from isolates of yeast and mould using whatman FTA filter papers[J].Mycopathologia,2010.445-449.
  • 9鲁巧云,余进,刘伟,杨建勋,马蕾,李若瑜.FTA-DNA直接提取法在病原真菌分子鉴定中的应用[J].中国真菌学杂志,2010,5(3):137-140. 被引量:9
  • 10黄燕,张龙现,李晓虹,徐梅倩,吕彪,韩伟,朱顺海,周洋,曹杰,何国声.用卡片PCR法检测卡耶他环孢子虫[J].中国兽医学报,2010,30(2):225-227. 被引量:1

二级参考文献41

  • 1刘景武,张伟,何俊萍,周巍,袁耀武.FTA滤膜用于PCR检测肉中的金黄色葡萄球菌[J].生物工程学报,2005,21(6):1009-1013. 被引量:23
  • 2罗玉柱,成述儒,Batsuuri Lkhagva,D.Badamdorj,Olivier Hanotte,韩建林.用mtDNA D-环序列探讨蒙古和中国绵羊的起源及遗传多样性[J].Acta Genetica Sinica,2005,32(12):1256-1265. 被引量:38
  • 3张守发,于龙政,刘冰.FTA纸片中保存的马巴贝虫DNA的PCR检测[J].中国兽医科学,2006,36(8):647-649. 被引量:5
  • 4Shields J M,Betty H O. Cyclospora cayetanensis:a review of an emrrging parasitic eoccidian[J]. Int J Parasitol, 2003,33 : 371-391.
  • 5Lainson R. The genus Cyclospora (Apicomplexa : Eimeriidae), with a description of Cyclospora schneideri n. sp. in the snake Anilius scytale (Aniliidae) from Amazonian Brazil-a review [ J ]. Mere Inst Oswardo Cruz Rio de Janeiro,2005,100(2):103-110.
  • 6Steiner T S,Thielman N M,Guerrant R L. Protozoal agents: what are the dangers for the public water supply [J]. Ann Rev Medi,1997,48:329-340.
  • 7Orlandi P A, Carter L, Brinker A M, et al. Targeting single nucleotide polymorphisms in the 18S rRNA gene to differentiate Cyclospora species from Eimecia species by muhiplex PCR[J]. App Environ Microbiol, 2003,69(8) :4806-4813.
  • 8Eberhard M L,da Silva A J,Lilley B G,et al. Morphologic and molecular characterization of new Cyclospora species from Ethiopian monkeys: C. cercopitheci sp. n. ,C. colobi sp. n. , and C. papionis sp. n[J]. Emerg Infect Dis,1999,5(5) :651-658.
  • 9Chu D T,Sherchand J B,Cross J H,et al. Detection of Cyclospora cayetanensis in animal fecal isolates from Nepal using an FTA filter base polymerase chain reaction method[J]. Am J Trop Med Hyg, 2004,71 (4) : 373-379.
  • 10Shields J M, Olson B H. PCR-restriction fragment length polymorphism method for detection of Cyclospora cayetanensis in environmental waters without microscopic confirmation[ J ]. Appl Environ Microb, 2003,69(8) :4662-4669.

共引文献16

同被引文献23

  • 1肖波,李岩,屈慧歌,王艳华.两种动物基因组DNA提取方法的比较[J].烟台师范学院学报(自然科学版),2005,21(1):56-58. 被引量:11
  • 2Schuster SC. Next-generation sequencing transforms today's biology [J].Nat Methods, 2008, 5 (1) : 16-18.
  • 3Hall L, Doerr KA, Wohlfiel SL, et al. Evaluation of the MicroSeq system for identification of mycobacteria by 16S ribosomal DNA sequencing and its integration into a routine clinical mycobacteriology laboratory [J]. J Clin Microbiol, 2003, 41 (4) : 1447-1453.
  • 4Tewari D, Cieply S, Livengoed J. Identification of bacteria recovered from animals using the 16S ribosomal RNA gene with pyrosequencing and Sanger sequencing [J]. J Vet Diagn Invest, 2011, 23 (6): 1104-1108.
  • 5Fukushima M, Kakinuma K, Kawaguchi R. Phylogenetic analysis of Salmonella, Shigella, and Escherichia coli strains on the basis of the gyrB gene sequence [J]. J Clin Microbiol, 2002, 40 (8) : 2779-2785.
  • 6Janda JM, Abbott SL. 16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: pluses, perils, and pitfalls[J]. J Clin Microbiol, 2007, 45 (9) : 2761-2764.
  • 7Harris KA, Hartley JC. Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service [J]. J Med Microbiol, 2003, 52 (Pt8): 685-691.
  • 8Drancourt M, Bollet C, Carlioz A, et al. 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates [J]. J Clin Microbiol, 2000, 38 (10) : 3623-3630.
  • 9Pupo GM, Lan R, Reeves PR. Muhiple Independent origins of Shigella clones of Eschefiehia coli and convergent evolution of many of their characteristics [J]. Proc Natl Acad Sci U S A, 2000, 97 (19) : 10567-10572.
  • 10Lan R, Reeves PR. When does a clone deserve a name? A perspective on bacterial species based on population genetics [J]. Trends Mierobiol, 2001, 9 (9): 419-424.

引证文献2

二级引证文献5

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部