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Discovery of MicroRNAs Associated with the S Type Cytoplasmic Male Sterility in Maize 被引量:3

Discovery of MicroRNAs Associated with the S Type Cytoplasmic Male Sterility in Maize
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摘要 MicroRNAs (miRNAs) are endogenous small RNAs that play important regulatory roles in the growth and development processes of plants and animals. In this study, we examined the expression profiles of pollen miRNAs from a maize S type cytoplasmic male sterile line and its fertility restored line. In total, 100 known miRNAs belonging to 20 families and 81 novel miRNAs belonging to 44 families were identified. Two and seven known miRNAs had significant expression difference between the two lines at the level of P-value〈0.01 and 0.01〈P-value〈0.05, respectively. Four miRNAs showing 〉1.5 fold expression difference were verified by stem-loop RT-qPCR. Gene Ontology analysis of miRNA target genes revealed that these genes mainly participated in the transcriptional regulation processes. MicroRNAs (miRNAs) are endogenous small RNAs that play important regulatory roles in the growth and development processes of plants and animals. In this study, we examined the expression profiles of pollen miRNAs from a maize S type cytoplasmic male sterile line and its fertility restored line. In total, 100 known miRNAs belonging to 20 families and 81 novel miRNAs belonging to 44 families were identified. Two and seven known miRNAs had significant expression difference between the two lines at the level of P-value〈0.01 and 0.01〈P-value〈0.05, respectively. Four miRNAs showing 〉1.5 fold expression difference were verified by stem-loop RT-qPCR. Gene Ontology analysis of miRNA target genes revealed that these genes mainly participated in the transcriptional regulation processes.
出处 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2013年第2期229-238,共10页 农业科学学报(英文版)
基金 financially supported by the National Natural Science Foundation of China(31171565)
关键词 CMS-S MICRORNAS real-time PCR Solexa sequencing target gene MAIZE CMS-S, microRNAs, real-time PCR, Solexa sequencing, target gene, maize
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  • 1Cardon G,Hohmann S,Klein J,Netteshelm K,Seedler H,Huijser P (1999) Molecular chamctarisation of the Arabidopsis SBP-box genes.Gene 237,91-104.
  • 2Cardon GH,Hohmann S,Nettesheim K,Seedler H,HuijJser P (1997) Functional analysis of the Arabidopsis thaliana SBP-box gene SPL3:a novel gene involved in the floral transition.Plant J.12,367-377.
  • 3Chuck G,Meeley R,Irish E,Sakai H,Hake S (2007) The maize tasselseed4 microRNA controls sex determination and meristem cell fate by targeting Tasselseed6/indeterminata spikelet1.Nat.Genet.39,1517-1521.
  • 4Eriksson M,Moseley JL,Tottey S,Del Cempo JA,Quinn J,Kim Y,Merchant S (2004) Genetic dissection of nutritional copper signaling in chlamydomonas distinguishes regulatory and target genes.Genetics 168,795-807.
  • 5Fomara F,Coupland G (2009) Plant phase transitions make a SPLash.Cell 138,625-627.
  • 6Gandikota M,Birkenbihl R,Hhmann S,Cardon G,Seedler H,Huijser P (2007) The miRNA156/157 recognition element in the 3'UTR of the Arabidopsis SBP box germ SPL3 prevents early flowering by translational inhibition in seedlings.Plant J.49,683-693.
  • 7Guo J,Song J,Wang F,Zhang XS (2008) Genome-wide identification and expression analysis of rice cell cycle genes.Plant Mol.Biol.64,349-360.
  • 8Jiao Y,Wang Y,Xue D,Wang J,Yan M,Liu G,Dong G,Zeng D,Lu Z,Zhu X,Qian Q,Li J (2010) Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice.Nat.Genet.42,541-544.
  • 9Klein J,Saedler H,Huijser P (1996) A new family of DNA binding proteins includes putative transcriptional regulators of the Antirrhinum majus floral meristem identity gene SQUAMOSA.Mol.Gen.Genet.250,7-16.
  • 10Kropat J,Tottey S,Birkenbihl RP,Depege N,Huijeer P,Merchant S (2005) A regulator of nutritional copper signaling in Chlamydomonas is an SBP domain protein that recognizes the GTAC core of copper response element.Proc.Natl.Acad.Sci.USA 102,18730-18735.

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