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瘤胃厌氧真菌的作用及其分子生物学研究方法 被引量:2

Rolse and Molecular Biology Research Methods of Rumen Anaerobic Fungi
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摘要 瘤胃厌氧真菌这一特殊的菌群除在瘤胃中发挥重要作用外,其分泌的高活性纤维素酶的应用价值也备受关注,因传统培养的局限性,因此,利用分子生物技术开展的研究逐渐深入。作者主要从瘤胃厌氧真菌的特点和多样性出发,厌氧真菌对结构性碳水化合物、淀粉和蛋白质的降解及在瘤胃生态环境中的作用进行了分析,并对研究瘤胃厌氧真菌的分子生物学方法如内转录间隔区(ITS)、变性梯度凝胶电泳(DGGE)、限制性片段长度多态性(RFLP)、实时荧光定量PCR(Real-timePCR,RT-PCR)和宏基因组学(metagenomics)等进行了阐述,以期为瘤胃厌氧真菌的研究提供参考。 Rumen anaerobic fungi is a special flora besides in the rumen plays an important role,attracting more attention due to the application value of the secretion of high activity cellulase.Because of the limitation of the traditional culture,the use of molecular biological techniques to do research is in the ascendant.In this paper,the characteristics and diversities of anaerobic fungi,anaerobic fungal degradation of structural carbohydrates,starch and protein,and the ecological environment in the rumen had been analysed.Meanwhile,the molecular biology methods of ITS,DGGE,RFLP,RT-PCR and metagenomics were discussed,we expected to provide a reference for the anaerobic fungal research.
出处 《中国畜牧兽医》 CAS 北大核心 2013年第3期71-76,共6页 China Animal Husbandry & Veterinary Medicine
基金 国家自然科学基金项目(31060314 30960256) 云南省自然科学基金项目(2010CD059) 云南省中青年学术和技术带头人后备人才项目(2011HB025 31160467)
关键词 瘤胃 厌氧真菌 多样性 内转录间隔区 变性梯度凝胶电泳 限制性片段长度多态性 实时荧光定量PCR 宏基因组学 rumen anaerobic fungi diversity ITS DGGE RFLP Real time-PCR metagenomics
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参考文献45

  • 1毛胜勇,王全军,姚文,朱伟云.去除瘤胃厌氧真菌对山羊瘤胃消化代谢的影响[J].南京农业大学学报,2002,25(1):61-64. 被引量:21
  • 2冯薇,王加启,刘开朗,卜登攀,李旦,杨开伦.参与瘤胃内纤维素降解过程的主要微生物研究进展[J].中国畜牧兽医,2011,38(2):37-42. 被引量:10
  • 3杭晓敏,杨虹,Whiteby Corne.垃圾填埋场中厌氧真菌18S rDNA的PCR扩增及鉴定[J].生物工程学报,2001,17(5):515-519. 被引量:30
  • 4潘康成,杨金龙,张钧利,等.产纤维素酶厌氧真菌菌株的筛选及酶学性质的研究[A].中国畜牧兽医学会动物微生态学分会第四届第九次学术研讨会论文集[C].2008.
  • 5霍鲜鲜,侯先志,李大彪,敖力格日玛.驱除瘤胃真菌对绵羊瘤胃内纤维物质降解的影响[J].畜牧兽医学报,2006,37(5):447-451. 被引量:2
  • 6Chaudhary U B,Gupta V K,Singh M. Molecular identification of rumen fungi Pirornyces and Orpinomyces based on amplification of ITS1 region[J]. Indian Veterinary Journal, 2008,85:476 480.
  • 7Chen Y C,Tsai S D,Cheng H L,et al. Caecomyces syrnpodialis sp. nov. ,a new rumen fungus isolated from Bos indicus[J]. My- cologia, 2007,99 ( 1 ) : 125 - 130.
  • 8Chen Y C,Chiang Y C,Hsu F Y,et al. Structural modeling and further improvement in pH stability and activity of a highly-ac- tive xylanase from an uncultured rumenfungus[J]. Bioresource Technologia, 2012,123 : 125- 134.
  • 9Dehority 13 A,Tirabasso P A. Antibiosis between ruminal bacte ria and ruminal fungi[J]. Applied and Environmental Microbiolo- gy, 2000,66(7) :2921-2927.
  • 10Denman S E,MeSweeney C S. Development of a Real-time PCR assay for monitoring anarobic fungal and cellulolytic bacterial popolations within the rumen[J]. FEMS Microbiology Ecology, 2006,58(3) :572-582.

二级参考文献54

  • 1Flint J H, Bayer A E, Rincon T M, et al. Polysaccharide utiliza tion by gut bacteria: potential for new insights from genomic analysis[J]. Nature Reviews Microbiology, 2008(6) : 121 - 131.
  • 2Goldstone D C, Villas BOas S G, Till M, et al. Structural and functional characterization of a promiscuous feruloyl esterase (EstlE) from the rumen bacterium Butyrivibrio proteoclasticus [J]. Proteins,2010,178(6) :1457-1469.
  • 3Helaszek C T,White B A. Cellobiose uptake and metabolism by Ruminococcus flavefaciens [J]. Appl Environ Microbiol, 1991, 57(1):64-68.
  • 4Jindou S, Brulc J M, Levy Assaraf M, et al. Cellulosome gene cluster analysis for gauging the diversity of the ruminal cellulolyric bacterium Ruminococcus flavefaciens[J].FEMS Microbiol Lett,2008,285(2) :188-194.
  • 5Kang S,Denman S E, Morrison M,et al. An efficent RNA extraction method for estimating gut microbial diversity by polymerase chain reaetion[J]. Curr Microbiol, 2009(58): 464-471.
  • 6Koike S,Handa Y,Goto H,et al. Molecular monitoring and isolation of previously uncultured bacterial strains from the sheep rumen. Appl Environ Microbiot,2010,76(6):1887-1894.
  • 7Koike S, Yoshitani S, Kobayashi Y, et al. Phylogenetic analysis of fiber-associated rumen bacterial community and PCR detection of uncultured bacteria[J]. FEMS Microbiology Letters, 2003(229) : 23-30.
  • 8Krause D O,Denman S E,Maekie R I,et al. Opportunities to improve fiber degradation in the rumen: microbiology, ecology and genomics[J]. Microbiology Reviews, 2003(27) : 663-693.
  • 9Laure R,Yu Z T,Parisi V A,et al. Novel microbial diversity adherent to plant biomass in the herbivore gastrointestinal tract,as revealed by ribosomal intergenic spacer analysis and rrs gene sequencing[J]. Environ Microbiol, 2005 (7) : 530-543.
  • 10Miron J, Ben-Ghedalia D, Morrison M. Invited review: adhesion mechanisms of rumen cellulolytic bacteria[J]. Journal of Dairy Science, 2001,84(6) : 1294- 1309.

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