EV71、CA16及通用型肠道病毒实时荧光定量PCR诊断试剂盒的研发

Development of EV71, CA16 and other enterovirus vrial real-time qualitative PCR diagnostic kit

目的 研制一种新的含竞争性内标引物,能同时检测EV71、CA16及通用型肠道病毒的四重实时荧光定量PCR诊断试剂盒,用于手足口病的临床诊断及流行病学监测.方法 设计特异性的EV71型、CA16型及其他型肠道病毒和内参基因的引物,改进病毒核酸提取方法,优化实时荧光定量PCR检测体系,并研究产品的准确度、稳定性、精密度和扩增效率和检测线性范围.结果 本试剂盒的引物和探针特异性好,试剂盒采用的的病毒RNA抽提效果与QIAGEN公司QIAamp Viral RNAmini Kit抽提效果相当,但具有更低的试剂成本.优化引物探针浓度分别为0.2μmol/L的上下游引物浓度、0.06 μmol/L的通用探针浓度、0.08 μmol/L的EV71分型探针浓度和0.08μmol/L的CA16分型探针浓度.产品具有较好的稳定性和良好的准确度、精密度,CA16、EV71和肠道病毒通用型对引物的扩增效率分别是106％、101％和105％,线性检测范围是109拷贝/μl ～ 102拷贝/μl.结论 采用四重荧光定量PCR技术开发的能同时检测EV71、CA16、其他肠道病毒和内标的手足口病诊断试剂盒具有良好的准确性、稳定性、精密度和扩增效率等,具有很好的临床应用价值.

Objective A novel multiplex real-time RT-PCR kit was developed to detect EV71,CoxA16 and other human enteroviruses simultaneously with an internal amplification control to avoids false negatives,which used for hand,foot and mouth disease in the clinical diagnosis and epidemiological surveillance.Methods Design specific primers and probes of EV71,CA16,other intestinal virus and internal amplification control,improve the extraction method of virus nucleic acid.Optimization the detection system of real-time quantitative PCR.Research the products of the accuracy,stability,precision,amplification efficiency and detection of linear range.Results The primers and probes had high spicificity.The Viral RNA extraction effect of this Kit is as same as that of QIAamp Viral RNA mini Kit （QIAGEN company）,but less reagent cost.The optimal concentrations of primers and probes are 0.2 μmol/L for all the upstream and downstream primers,0.06 μmol/L for probes of other human enteroviruse,0.08 μmol/Lfor probes of EV71 and CA16 respectively.The kit has good stability,accuracy and precision.The amplification efficiencies of EV71,CoxA16 and other human enteroviruses are 106％,101％ and 105％ and the detection of linear range is from 109 copies/μl-102 copies/μl.Conclusion The novel multiplex realtime RT-PCR kit for detecting EV71,CoxA16 and other human enteroviruses simultaneously with an internal amplification control has good stability,accuracy,precision and amplification efficiencies.So it has great value in clinical application.