期刊文献+

Sequencing and Phylogenetic Analysis of Potato virus Y Liaoning Isolate in China

Sequencing and Phylogenetic Analysis of Potato virus Y Liaoning Isolate in China
下载PDF
导出
摘要 Complete genome sequence of Potato virus Y Liaoning isolate (PVY-LN) causing tobacco vein necrosis symptoms were isolated from Liaoning Province in China. Genome sequences of PVY-LN was 9 714 nucleotides in length, excluding the 3′- terminal poly (A) tail. PVY-LN encodes a single long open reading frame (ORF) of polyprotein that is predicted to be cleaved into ten mature proteins by three viral proteases. No recombination can be predicted in PVY-LN sequences compared with that of the other PVY strains using Recombination Detection Programe v. 4.16 (RDP4). Complete genome sequence comparison and phylogenetic analysis indicated that PVY-LN is closely related to PVY necrosis strain (PVYN). Complete genome sequence of Potato virus Y Liaoning isolate (PVY-LN) causing tobacco vein necrosis symptoms were isolated from Liaoning Province in China. Genome sequences of PVY-LN was 9 714 nucleotides in length, excluding the 3′- terminal poly (A) tail. PVY-LN encodes a single long open reading frame (ORF) of polyprotein that is predicted to be cleaved into ten mature proteins by three viral proteases. No recombination can be predicted in PVY-LN sequences compared with that of the other PVY strains using Recombination Detection Programe v. 4.16 (RDP4). Complete genome sequence comparison and phylogenetic analysis indicated that PVY-LN is closely related to PVY necrosis strain (PVYN).
出处 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2013年第7期1195-1200,共6页 农业科学学报(英文版)
基金 supported by the Programs for Science and Technology of State Tobacco Monopoly Administration,China ([2010]182) the Science and Technology of Liaoning Province Tobacco Monopoly Administration,China ([2010]86) the Key Programe of Anhui Province Tobacco Monopoly Administration, China (20100551005)
关键词 PVY Liaoning isolate CLONING genome sequencing PHYLOGENY PVY Liaoning isolate, cloning, genome sequencing, phylogeny
  • 相关文献

参考文献1

二级参考文献5

  • 1Jiong Chen,Jianping Chen,M. J. Adams. Characterisation of potyviruses from sugarcane and maize in China[J] 2002,Archives of Virology(6):1237~1246
  • 2J. Chen,H. Y. Zheng,J. P. Chen,M. J. Adams. Characterisation of a potyvirus and a potexvirus from Chinese scallion[J] 2002,Archives of Virology(4):683~693
  • 3H. M. Zhang,J. P. Chen,M. J. Adams. Molecular characterisation of segments 1 to 6 of Rice black-streaked dwarf virus from China provides the complete genome[J] 2001,Archives of Virology(12):2331~2339
  • 4Jiong Chen,Jianping Chen,Jishuang Chen,M. J. Adams. Molecular characterisation of an isolate of Dasheen mosaic virus from Zantedeschia aethiopica in China and comparisons in the genus Potyvirus[J] 2001,Archives of Virology(9):1821~1829
  • 5J. Chen,M. J. Adams. A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family[J] 2001,Archives of Virology(4):757~766

共引文献29

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部