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O-glycan profiling of serum glycan for potential renal cancer biomarkers

O-glycan profiling of serum glycan for potential renal cancer biomarkers
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摘要 Serum was obtained from 25 male renal cell carcinoma(RCC) patients and 21 healthy males.O-glycans were released by a-elimination reaction and purified by graphitized carbon cartridge solid phase extraction,then profiled by matrix-assisted laser desorption/ionisation-time of flight mass spectrometry.After noise removal and peak alignment,1372 peaks were extracted from 200000 data points.Feature peaks were analyzed by calculation of differential sensitivity and specificity.The combination of two feature peaks was chosen as a biomarker and could clearly differentiate RCC and normal samples in our study group. Serum was obtained from 25 male renal cell carcinoma (RCC) patients and 21 healthy males. O-glycans were released by a β-elimination reaction and purified by graphitized carbon cartridge solid phase extraction, then profiled by matrix-assisted laser desorption/ionisation-time of flight mass spectrometry. After noise removal and peak alignment, 1372 peaks were extracted from 200000 data points. Feature peaks were analyzed by calculation of differential sensitivity and specificity. The combination of two feature peaks was chosen as a biomarker and could clearly differentiate RCC and normal samples in our study group.
出处 《Science China(Life Sciences)》 SCIE CAS 2013年第8期739-744,共6页 中国科学(生命科学英文版)
基金 supported by the National Natural Science Foundation of China (30900254)
关键词 mass spectrometry GLYCAN renal cell carcinoma biomarkers 生物标志物 肾细胞 聚糖 癌症 血清 电离飞行时间质谱 基质辅助激光解吸 固相萃取
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