期刊文献+

苹果‘金冠’AGO1基因克隆及与发育相关miRNA表达分析 被引量:4

Clone and expression of AGO1 gene and development-related miRNA in apple(Golden Delicious)
原文传递
导出
摘要 为明确miRNA沉默靶基因的调控机理,克隆AGO1蛋白基因并了解其作为沉默复合物核心成员在miRNA沉默通路中的作用,本研究在分析‘金冠’苹果基因组的基础上,以‘金冠’叶片cDNA为模板,克隆获得了3 234bp AGO1基因全长,蛋白分子质量为119ku,等电点为9.41,包含2个保守的AGO蛋白特征结构域:PAZ和Piwi区,命名为MdAGO1。苹果‘金冠’不同组织MdAGO1基因及13种与发育相关miRNA实时定量PCR分析结果表明:1)MdAGO1在花和果实中表达量均高于叶片;2)miRNA在果实和花中表达量均较高,叶片相对较低。MdAGO1与13种发育相关miRNA表达一致,在苹果中MdAGO1可能与miRNA协同作用调控植物的生长发育。 As the internal component of RNA induced silencing complex,ARGONAUTE(AGO) protein palys an important role in all known small RNA-directed regulatory pathways. In this study, the target cDNA clone of AGO1 was isolated from library prepared from Golden Delicious using RT-PCR technique. The cDNA was 3 234 bp , and would encode a protein of 1 078 amino acid with a molecular mass of 119 ku and theoretical isoelectric point of 9.41. The protein contained 2 conserved domains, PAZ and Piwi. Quantitative real-time PCR analysis revealed that Md-AG01 was higher in flower and fruit than leaf. The aboundance of detected decelopmet related miRNA were positively correlated to Md- AGO1. Md-AGO1 and miRNA may regulate the plant growth and development together in apple.
出处 《中国农业大学学报》 CAS CSCD 北大核心 2013年第5期69-76,共8页 Journal of China Agricultural University
基金 科技部科技基础性工作专项(2012FY110100)
关键词 苹果 AGO1 基因克隆 发育相关miRNA 表达分析 apple AGO1 gene clone development-related miRNA expression analysis
  • 相关文献

参考文献22

  • 1Megha G, Phillip D Z. Small silencing RNAs, An expanding universe[J]. Nature, 2009 ,10,94-108.
  • 2李超,杜志游,陈集双.解读AGO蛋白结构及其功能[J].中国生物化学与分子生物学报,2009,25(11):969-976. 被引量:22
  • 3Vaucheret H. Plant argonautes[J]. Trends Plant Sci, 2008,13 (7),350-358.
  • 4ZhuJ K. Reconstituting plant miRNA biogenesis[J]. PNAS, 2008,105(7),9851-9852.
  • 5Chen X M. A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development[J]. Science, 2004,303(5666),2022-2025.
  • 6WangJ W, Czech B, Weigel D. miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabido psis thaliana[J]. Cell, 2009,138,738-749.
  • 7Pulido A, Laufs P. Co-ordination of developmental processes by small RNAs during leaf development[J].J Exp Bot,2010,61, 1277-1291.
  • 8Bartel D P. MicroRNAs , Genomics , biogenesis, mechanism, and function[J]. Cell, 2004 ,116(2) ,281-297.
  • 9PalatnikJ F, Allen E, W u X, et al. Control of leaf morphogenesis by microRNA[J]. Nature, 2003,425,257-263.
  • 10胥猛,谢雯凡,潘惠新,苏晓华,张守攻,黄敏仁.杨树ARGONAUTE基因的克隆及序列分析[J].林业科学,2011,47(3):46-51. 被引量:13

二级参考文献65

  • 1Vaucheret H. Post-transcriptional small RNA pathways in plants: mechanisms and regulations[J]. Genes Dev, 2006, 20(7) : 759-771.
  • 2Bohmert K, Camus I, Bellini C, et al. AGO1 defines a novel locua of Arabidopsis controlling leaf development[J]. EMBO J, 1998, 17 (1): 170-180.
  • 3Cerutti L, Mian N, Bateman A. Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain[J]. Trends Biochem Sci, 2000, 2,$(10): 481-482.
  • 4Vaucheret H. Plant ARGONAUTES[ J]. Trends Plant Sci, 2008, 13 (7) : 350-358.
  • 5Hall T M. Structure and function of argonaute proteins [ J ]. Structure, 2005, 13(10) : 1403-1408.
  • 6Song J J, Smith S K, Hannon G J, et al. Crystal structure of Argonaute and its implications for RISC slicer activity [ J ]. Science, 2004, 305(5689) : 1434-1437.
  • 7Yuan Y R, Pei Y, Ma J B, et al. Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage [J]. Mol Cell, 2005, 19(3) : 405-419.
  • 8Lingel A, Simon B, Izaurralde E, et al. Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain [ J ]. Nature, 2003, 426(6965): 465-469.
  • 9Lingel A, Simon B, Izaurralde E, et al. Nucleic acid 3 '-end recognition by the Argonaute2 PAZ domain[J]. Nat Struct Mol Biol, 2004, 11(6): 576-577.
  • 10SongJ J, Liu J, Tolia N H, et al. The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes[J]. Nat Struct Biol, 2003, 10(12) : 1026-1032.

共引文献32

同被引文献52

引证文献4

二级引证文献7

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部