期刊文献+

地衣芽孢杆菌(Bacillus licheniformis)外切葡聚糖酶CelB基因的发掘及功能鉴定 被引量:4

Exploring and Function Characteristics of Exo-1,4-β-D-glucanase CelB Gene of Bacillus licheniformis
下载PDF
导出
摘要 从地衣芽孢杆菌的基因组数据中寻找与外切葡聚糖酶相似性高的DNA序列,发现在地衣芽孢杆菌基因组中CelB DNA片段具有很高的序列相似性。在大肠杆菌中对来自地衣芽孢杆菌的CelB基因DNA片段进行表达并纯化蛋白质。CelB蛋白质对纤维素底物具有活性。根据糖基水解酶家族48的保守活性位点设计突变策略对CelB进行突变,突变体丧失对底物的活性,说明它具有糖基水解酶家族48的外切葡聚糖酶的典型活性位点。 Screening of DNA sequence similar with exo-1,4-β-D-glucanase from the genome data of Bacillus licheniformiswith bioinformatic techniques,one DNA fragmentCelBshowed high similarity was found.This DNA was cloned,expressed,and the result protein was purified.The CelB showed activity to cellulose substrate.Based on the conserved activity sites of glycoside hydrolase family 48 protein,amino acid sites of CelB were choosed for mutation and the mutant of CelB lost the activity,thus it showed that CelB contain the typical active sites of family 48.In this work,a exo-1,4-β-D-glucanase gene was successfully found and cloned from B.licheniformis,it establishes the foundation for the further study of the cellulase system and their working mechanism ofB.licheniformis.
出处 《生物技术通报》 CAS CSCD 北大核心 2013年第9期151-157,共7页 Biotechnology Bulletin
基金 国家自然科学基金项目(31060125) 广西科学院基本科研业务费项目(12YJ25SW05)
关键词 外切葡聚糖酶 基因组信息学 地衣芽孢杆菌 蛋白质结构 定点突变 Exo-1 4-β-D-glucanase Genome informatics Bacillus licheniformisProtein structure Site-directed mutagenesis
  • 相关文献

参考文献22

  • 1Zhang ZS, Donaldson AA, Ma XX. Advancements and futurc directions in enzyme technology for biomass conversion [ J ] . Biotechnology Advances, 2012, 30 ( 4 ) : 913-919.
  • 2Percival Zhang YH, Himmel ME, Mielenz JR. Outlook for cellulase improvement : screening and selection strategies [ J ] . Biotechnology Advances, 2006, 24 ( 5 ) : 452-481.
  • 3Morais S, Heyman A, Barak Y, ct al. Enhanced cellulose degradation by nano-complexed enzymes : Synergism between a scaffold- linked exoglucanase and a free endoglucanase [ J ] . Journal of Biotechnology, 2010, 147 ( 3-4 ) : 205-211.
  • 4Jeon SD, Yu KO, Kim SW, el al. The processive endoglucanase EngZ is active in crystalline celhdose degradation as a cellulnsomal subunit of Clostridium cellulovorar: [ J ] . New Biotechnology, 2012, 29 ( 3 ) : 365-371.
  • 5Bai AX, Zhao XY, Jin YW, et al. A novel thermophilic beta- glucosidase from Caldicellulosiruptor bescii : Characterization and its synergistic catalysis with other cellulases [ J ] . Journal of Molecular Catalysis B-Enzymatic, 2013, 85-86 : 248-256.
  • 6Li Y, Irwin DC, Wilson DB. Processivity, substrate binding, and me- chanism of cellulose hydrolysis by Thermobifidafusca Cel9A [J] . Applied and Environmental Microbiology, 2007, 73 ( 10 ) : 3165- 3172.
  • 7Kipper K, Valjamae P, Johansson G. Processive action of cellobiohy- drolase CeI7A from Trichoderma reesei is revealed as 'burst' kinetics on fluorescent polymeric model substrates [ J ]. Biochemical Journal, 2005, 385 ( Pt 2 ) : 527-535.
  • 8Dashtban M, Maki M, Leung KT, et al. Cellulase activities in biomass conversion : measurement methods and comparison[J].Critical Reviews in Biotechnology, 2010, 30 i 4 ) : 302-309.
  • 9Presecki AV, Blazevic ZF, Vasic-Racki E. Mathematical modeling of maize starch liquefaction catalyzed by alpha-amylases from Bacillus licheniformis : effect of calcium, pH and temperature [ J ] . Bioprocess and Biosystems Engineering, 2013, 36 ( 1 ) : 117-126.
  • 10Rey MW, Ramaiya P, Nelson BA, et al. Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species [ J ] . Genome Biology, 2004, 5 (10): R77.

同被引文献52

  • 1周成旭,田甜,陈海敏,严小军,骆其君.海洋微藻β-葡聚糖的生物活性分析[J].海洋与湖沼,2014,45(1):66-72. 被引量:5
  • 2Percival Zhang Y H, Himmel M E, Mielenz J R. Outlook for cellulase improvement: screening and selection strat- egies[J]. Bioteehnol Adv, 2006,24 (5) : 452-481.
  • 3Mishra J, Khurana S, Kumar N, et al. Molecular cloning, characterization, and overexpression of a novel [Fe]- hydrogenase isolated from a high rate of hydrogen pro- ducing Enterobacter cloacae IIT-BT 08[J]. Biochem Bio- phys Res Commun,2004,324(g) :679-685.
  • 4Cantarel I3 L,Coutinho P M,Rancurel C,et al. The Car- bohydrate-Active EnZymes database (CAZy) an expert resource for Glycogenomics [J]. Nucleic Acids Res, 2009,37(Database issue) :D233-238.
  • 5Letunic I,Doerks T, Bork P. SMART 7:recent updates to the protein domain annotation resource[J]. Nucleic Acids Res, 2012,40 (Database issue) : D302-305.
  • 6Sambrook J, Russell D W. Molecular cloning..a laborato- ry manual[M]. N Y: Cold Spring Harbor Laboratory Press, 2001.
  • 7Bradford M. A rapid and sensitive method for the quan- titation of microgram quantities of protein utilizing the principle of protein-dye binding [J]. Anal Biochem, 1976,72(1-2) :248-254.
  • 8Morais S, Heyman A, Barak Y, et al. Enhanced cellulose degradation by nano-complexed enzymes:Synergism be- tween a scaffold-linked exoglucanase and a free endoglu- canase[J]. J Biotechnol, 2010,147 (3-4) .. 205-211.
  • 9Jeon S D, Yu K O,Kim S W,et al. The processive en- doglucanase EngZ is active in crystalline cellulose degra- dation as a cellulosomal subunit of Clostridium cellulovorans [J]. N Bioteehnol,2012,29(3) :365-371.
  • 10Bai A X, Zhao X Y, Jin Y W. A novel thermophilie beta-glucosidase from Caldicellulosiruptor bescii : Characterization and its synergistic catalysis with oth- er cellulases[J]. J Molecul Catal B-Enzym, 2013,85- 86:248-256.

引证文献4

二级引证文献8

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部