摘要
目的:分析不同物种FADD的蛋白序列进化规律及FADD在不同组织中的转录和表达分布特征。方法:使用Mega 5.0软件对主要物种中FADD的蛋白序列进行比对分析,根据蛋白序列相似性使用邻近法绘制进化树。取FADD+/-小鼠脑、肝、肾、心、肺、肌肉、脾脏、胃、肠,分别提RNA并反转录成cDNA和同时制备相应的蛋白样品,将FADD+/-小鼠在核酸水平和蛋白水平各主要组织中FADD的表达结果与小鼠FADD表达的UniGene EST Profile结果进行综合比较分析。结果:获得不同物种FADD的蛋白序列比对结果及进化规律,确定FADD在小鼠肺、心脏、胃中相对高表达的可靠结果,其他组织中FADD的表达量还有待进一步验证。结论:FADD的蛋白序列在进化中相对比较保守,其在小鼠肺、心脏、胃组织中高表达,这为进一步研究FADD在不同组织中生物功能奠定了良好的基础。
Objective: To analyze the evolution of FADD protein in different species and its transcription and expression distribution characteristics in different tissues .Methods: Protein sequences of FADD in eight main species were compared and analyzed by using the software Mega 5.0 , and the neighbor-joining phylogenetic tree was drawn according to the protein sequence similarity .FADD+/-mice were sacrificed and their brain , liver, kidney, heart, lung, muscle, spleen, stomach, intestine were obtained and then divided into two parts .Half of the tissues were used to extract RNA for RT-PCR, the rests were used for western blot analyses .The results of FADD expression in FADD+/-mice were compared with the results of UniGene EST Profile at both mRNA and protein levels.Results: On the one hand, we obtained the protein sequence alignment and evolution law of FADD in different species.On the other hand, we found FADD expression was relatively high in lung , heart, stomach, while the expression of FADD in other tissues remains to be verified .Conclusion:The present studies find that FADD is highly conserved in the process of evolution and it is highly expressed in lung , heart and stomach .These results provide a foundation for further investigation of the biological function of FADD in different tissues .
出处
《东南大学学报(医学版)》
CAS
2013年第6期680-685,共6页
Journal of Southeast University(Medical Science Edition)
基金
国家自然科学基金资助项目(30270291
30330530
30425009)
教育部博士点基金资助项目(20030284040)
关键词
FADD
序列比对
邻近法
进化树
组织分布
Fas- associated death domain
sequence alignment
neighbor-joining
phylogenetic tree
tissue distribution