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Gene Expression Profiling Related to Hyphal Growth in a Temperature-Sensitive Mutant of Magnaporthe oryzae

Gene Expression Profiling Related to Hyphal Growth in a Temperature-Sensitive Mutant of Magnaporthe oryzae
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摘要 The rice blast,caused by fungus Magnaporthe oryzae,is a major constraint to the world food security.Hyphal growth is the foundation of fungal development and proliferation of fungi.To investigate genes involved in hyphal growth of this fungus,digital gene expression tag profiling was used to compare a previously generated temperature-sensitive mutant which defect at hyphae growth and reduction on pathogenicity,with its related wildtype strain.416 genes were detected as differential expression,178 of which were specifically expressed in Guy-11 but down-regulated expression in the mutant.Functional classification analysis revealed the phenotype mutation may be mainly caused by a defection in translational and vacuole- related processes.The results and the protocol used will improve our knowledge on morphogenesis and promote the further study on M.oryzae pathogenesis. The rice blast,caused by fungus Magnaporthe oryzae,is a major constraint to the world food security.Hyphal growth is the foundation of fungal development and proliferation of fungi.To investigate genes involved in hyphal growth of this fungus,digital gene expression tag profiling was used to compare a previously generated temperature-sensitive mutant which defect at hyphae growth and reduction on pathogenicity,with its related wildtype strain.416 genes were detected as differential expression,178 of which were specifically expressed in Guy-11 but down-regulated expression in the mutant.Functional classification analysis revealed the phenotype mutation may be mainly caused by a defection in translational and vacuole- related processes.The results and the protocol used will improve our knowledge on morphogenesis and promote the further study on M.oryzae pathogenesis.
出处 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2013年第12期2189-2196,共8页 农业科学学报(英文版)
基金 supported by the Natural Science Foundation of Zhejiang Province,China(Y3110028 and LQ12C14003)
关键词 differential expressed gene QRT-PCR gene ontology hyphal growth VACUOLE differential expressed gene qRT-PCR gene ontology hyphal growth vacuole
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参考文献37

  • 1Akmaev V R, Wang C J. 2004. Correction of sequence- based artifacts in serial analysis of gene expression. Bioinformatics, 20, 1254-1263.
  • 2Altschul S F, Madden T L, Sch~iffer A A, Zhang J, Zhang Z, Miller W, Lipman D J. 1997. Gapped BLAST and PSI- BLAST: a new generation of protein database search programs. Nucleic Acids Research, 25, 3389-3402.
  • 3Anisimov S V. 2008. Serial analysis of gene expression (SAGE): 13 years of application in research. Current Pharmaceutical Biotechnology, 9, 338-350.
  • 4Barrett T, Troup D B, Wilhite S E, Ledoux P, Rudnev D, Evangelista C, Kim I F, Soboleva A, Tomashevsky M, Marshall K A, et al. 2009. NCBI GEO: archive for high-throughput functional genomic data. Nucleic Acids Research, 37, D885-D890.
  • 5Bhadauria V, Popescu L, Zhao W S, Peng Y U 2007. Fungal transcriptomics. Microbiological Research, 162, 285- 298.
  • 6Boyle E I, Weng S, Gollub J, Jin H, Botstein D, Cherry J M, Sherlock G. 2004. GO::TermFinder-open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes. Bioinformatics, 20, 3710- 3715.
  • 7Caracuel-Rios Z, Talbot N J. 2007. CellulaT differentiation and host invasion by the rice blast fungus Magnaporthe grisea. Current Opinion in Microbiology, 10, 339-345.
  • 8Casselton L, Zolan M. 2002. The art and design of geneticscreens: filamentous fungi. Nature Reviews Genetics, 3, 683 -697.
  • 9Dean R A, Talbot N J, Ebbole D J, Farman M L, Mitchell T K, Orbach M J, Thon M, Kulkarni R, Xu J R, Pan H, et al. 2005. The genome sequence of the rice blast fungus Magnaporthe grisea. Nature, 434, 980-986.
  • 10Gowda M, Venu R C, Raghupathy M B, Nobuta K, Li H, Wing R, Stahlberg E, Couglan S, Haudenschild C D, Dean R, et al. 2006. Deep and comparative analysis of the mycelium and appressorium transcriptomes of Magnaporthe grisea using MPSS, RL-SAGE, and oligoarray methods. BMC Genomics, 7, 310.

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