期刊文献+

病毒样颗粒为阳性对照的H5N1实时荧光定量PCR检测方法的建立 被引量:2

Establishment of H5N1 Real-time Fluorescence Quantitative PCR Detection Method Using Virus-like Particles as the Positive Control
下载PDF
导出
摘要 合适的标准品对实时荧光定量PCR(qPCR)检测高致病性H5N1禽流感病毒(avain influenza virus,AIV)十分重要.本研究将H5N1AIV HA基因的部分序列插入到能够表达MS2噬菌体病毒样颗粒(virus-like particle,VLP)DNA序列的表达载体上,诱导表达后得到了包裹有H5N1AIV HA基因RNA片段的VLP.该VLP能够耐受核酶的消化,形态与MS2噬菌体病毒颗粒形态相同.利用表达的VLP作为阳性标准品及设计的特异性荧光探针、淬灭链,使用优化的qPCR反应体系,得到qPCR检测H5N1亚型AIV的阳性对照标准曲线.研究结果为高致病性H5N1亚型AIV的准确定量检测提供了基础. Appropriate standards are very important in detecting highly pathogenic H5N1 subtype avain influenza virus (AIV) by real time fluorescent quantitative PCR (qPCR).In this study,part of HA gene sequence of the H5N1 AIV was inserted into the expression vector with the expression of MS2 bacteriophage virus like particles (VLP).After that,the derivative HA VLP products were obtained,containing the RNA of parts of HA gene sequences by isopropyl β-D-1-thiogalactopyranoside induced expression.The HAVLP was able to tolerate nuclear enzyme digestion,of which morphological structure was the same as VLP.Using the expressed HAVLP as a positive control,the specific fluorescent probes and quenching were designed,and the positive control standard curve of qPCR detection of H5N1 subtype AIV was described through the optimum qPCR reaction system.The results laid a basic means for the quantitative detection of the highly pathogenic H5N1 subtype AIV.
出处 《厦门大学学报(自然科学版)》 CAS CSCD 北大核心 2014年第3期418-423,共6页 Journal of Xiamen University:Natural Science
基金 福建省自然科学基金(2010J01240) 厦门市科技计划项目(3502Z20103007)
关键词 H5N1亚型禽流感病毒 qPCR 病毒样颗粒 H5N1 avain influenza virus qPCR virus-like particles
  • 相关文献

参考文献15

  • 1Taisuke Horimoto, Yoshihiro Kawaoka. Pandemic threatposed by avian influenza a viruses [ J ]. Clinical Microbiology Reviews,2001,14(1) : 129-149.
  • 2卢亦愚,严菊英,冯燕,徐昌平,史雯,茅海燕.TaqMan-MGB荧光定量RT-PCR技术快速检测H5亚型禽流感病毒[J].中国病毒学,2006,21(5):472-476. 被引量:19
  • 3Li Peiqiong,Zhang Jun, Muller C P, et al.Development of a multiplex real-time polymerase chain reaction for the detection of influenza virus type A including H5 and H9 subtypes[J].Diagnostic Microbiology Infectious Disease, 2008,61(2):192-197.
  • 4Masukawa A, Miyachi H, Ohshima T, et al. Monitoring of inhibitors of the polymerase chain reaction for the detec- tion of hepatitis C virus using the positive internal control [J].Rinsho Byori, 1997,45(7): 673-678.
  • 5Paraskevis D, Haida C, Raptopoulou M, et al. Development and assessment of a novel real-time PCR assay for quantitation of HBV DNA [J].Journal Virological Methods,2002,103(2) :201-212.
  • 6Dreier J, Stormer M, Kleesiek K.Use of bacteriophage MS2 as an internal control in viral revcrse transcription-PCR assays [J].Joumal Clinical Microbiology,2005,43(9):4551-4557.
  • 7WalkerPeach C R,Winkler M, DuBois D B, et al. Ribonu- clease-resistant RNA controls (Armored RNA) for reverse transcription-PCR, branched DNA, and genotyping assays for hepatitis C virus[J].Clinical Chem- istry, 1999,45 (12) :2079-2085.
  • 8Zhan Sien, Li Jinming, Xu Ruihuan, et al. Armored long RNA controls or standards for branched DNA assay for detection of humanimmunodeficiency virus type 1 [J].Journal of Clinical Microbiology, 2009,47(8) : 2571-2576.
  • 9Song Liqiong, Sun Shipeng, Li Bo, et al. External quality assessment for enterovirus 71 and coxsackievirus A16 de- tection by reverse transcription-PCR using armored RNA as a virus surrogate[J].Journal of Clinical Microbiology, 2011,49(10) : 3591-3595.
  • 10窦敏,张国广,于广福,张红心,沈明山,陈亮.含口蹄疫病毒IRES RNA病毒样颗粒表达载体的构建[J].中国生物工程杂志,2007,27(9):31-35. 被引量:7

二级参考文献14

  • 1Jin-RongZhao,Yu-JieBai,Qing-HuaZhang,YanWan,DingLi,Xiao-JunYan.Detection of hepatitis B virus DNA by real-time PCR using TaqMan-MGB probe technology[J].World Journal of Gastroenterology,2005,11(4):508-510. 被引量:15
  • 2李伟,海荣,俞东征,张志凯,蔡虹.应用Taq Man荧光定量聚合酶链反应技术检测鼠疫耶尔森菌[J].中华流行病学杂志,2005,26(8):613-616. 被引量:9
  • 3Hien T T,De Jong M,Farrar J.Avian influenza-a challenge to global health care structures.N Engl J Med,2004,351(23):2363-2365.
  • 4Reid S M,Ferris N P,Hutchings G H,et al.Primary diagnosis of foot-and-mouth disease by reverse transcription polymerase chain reaction.Journal of Virological Methods,2000,89(1-2):167-176.
  • 5Pasloske B L,WalkerPeach C R,Obermoeller R D,et al.Armored RNA technology for production of ribonuclease-resistant viral RNA controls and standards.J Clin Microbiol,1998,36(21):3590-3594.
  • 6Hietala S K,Crossley B M.Armored RNA as Virus Surrogate in a Real-Time Reverse Transcriptase PCR Assay Proficiency Panel.J Clin Microbiol,2006,44(1):67-70.
  • 7Drosten C,Seifried E,Roth W K.TaqMan 5′-nuclease human immunodeficiency virus type 1 PCR assay with phage-packaged competitive internal control for high-throughput blood donor screening.J Clin Microbiol,2001,39:4302-4308.
  • 8Beld M,Minnaar R,Weel J,et al.Highly Sensitive Assay for Detection of Enterovirus in Clinical Specimens by Reverse Transcription-PCR with an Armored RNA Internal Control.J Clin Microbiol,2004,42(7):3059-3064.
  • 9Gavin G P,Peabody D S.Encapsidation of heterologous RNAs by bacteriophage MS2 coat protein.Nucleic Acids Research,1993,21(19):4621-4626.
  • 10Peabody D S.The RNA binding site of bacteriophage MS2 coat protein.The EMBO Journal,1993,12(2):595-600.

共引文献28

同被引文献10

引证文献2

二级引证文献5

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部