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RNA interference with DNA polymerase and synthesis 被引量:1

RNA interference with DNA polymerase and synthesis
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摘要 RNA can catalyze and participate in many chemical and biochemical reactions. Non-coding RNAs (ncRNA) can regulate cellular transcription and translation reactions. We have demonstrated biochemically that RNA can also interfere with DNA polymerization via transforming DNA polymerase into deoxyribonucleoside triphosphate diphosphatase (dNTP-DPase). RNA, even with six nucleotides, can transform DNA polymerase into dNTP-DPase, and the dNTP-DPase activity causes the hydrolysis of dNTPs into dNMPs and pyrophosphate. Moreover, we have found that DNA polymerases from several families generally have similar RNA-dependent dNTP-DPase activity. We have also observed that in the presence of RNA, when the dNTP concentrations are relatively low, and that the dNTP-DPase activity can deplete dNTPs and interfere with DNA polymerization Thus, we have discovered for the first time that in the presence of RNA, DNA polymerase can behave as a diphosphatase and inhibit DNA synthesis when dNTP quantity is low. These in vitro observations might imply a plausible role of RNA in vivo, such as suppressing DNA synthesis during a resting phase (Go) of the cell cycle, when RNA quantity is high and dNTP quantity is low. RNA can catalyze and participate in many chemical and biochemical reactions.Non-coding RNAs(ncRNA)can regulate cellular transcription and translation reactions.We have demonstrated biochemically that RNA can also interfere with DNA polymerization via transforming DNA polymerase into deoxyribonucleoside triphosphate diphosphatase(dNTP-DPase).RNA,even with six nucleotides,can transform DNA polymerase into dNTP-DPase,and the dNTP-DPase activity causes the hydrolysis of dNTPs into dNMPs and pyrophosphate.Moreover,we have found that DNA polymerases from several families generally have similar RNA-dependent dNTP-DPase activity.We have also observed that in the presence of RNA,when the dNTP concentrations are relatively low,and that the dNTP-DPase activity can deplete dNTPs and interfere with DNA polymerization.Thus,we have discovered for the first time that in the presence of RNA,DNA polymerase can behave as a diphosphatase and inhibit DNA synthesis when dNTP quantity is low.These in vitro observations might imply a plausible role of RNA in vivo,such as suppressing DNA synthesis during a resting phase(G0)of the cell cycle,when RNA quantity is high and dNTP quantity is low.
出处 《Science China Chemistry》 SCIE EI CAS 2014年第7期954-960,共7页 中国科学(化学英文版)
基金 financially supported by the Georgia Cancer Coalition(GCC)Distinguished Cancer Clinicians and Scientists,USA NSF(IIP-1340153)and NIH(R01GM095881)
关键词 RNA interference alternative activity of DNA polymerase non-coding RNA deoxyribonucleoside triphosphatediphosphatase DNA polymerization and synthesis DNA聚合酶 RNA干扰 DNA合成 dNTP 非编码RNA 生化反应 生物化学 腺苷二磷酸
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  • 1Fire A, Xu A, Montgomery S, Kostas SA, Driver SE, Mello CC. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature, 1998, 391 : 806-811.
  • 2Mello CC, Contre D Jr. Revealing the world of RNA interference, Nature, 2004.431 : 338-342.
  • 3Das SR, Piccirilli JA. General acid catalysis by the hepatitis delta virus ribozyme. Nat Chem Biol, 2005, 1: 45-52.
  • 4Ma JB, Yuan YR, Meister G, Pei Y, Tuschl T, Patel DJ. Structural basis for 5'-end-specific recognition of guide RNA by the A. fulgidus Piwi protein. Nature, 2005, 434:666-670.
  • 5Sudarsan N, Hammond M C, Block KF, Welz R, Barrick JE, Roth A, Breaker RR. Tandem riboswitch architectures exhibit complex gene control functions. Science, 2006, 314:300-304.
  • 6Macrae I J, Zhou K, Li F, Repic A, Brooks AN, Cande WZ, Adams PD, Doudna JA. Structural basis for double-stranded RNA processing by Dicer. Science, 2006, 311 : 195-198.
  • 7Cheah MT, Wachter A, Sudarsan N, Breaker RR. Control of alternative RNA splicing and gene expression by eukaryotic riboswitches. Nature, 2007, 447:497-500.
  • 8Nagano T, Mitchell JA, Sanz LA, Pauler FM, Ferguson-Smith AC, Feil R, Fraser P. The Air noncoding RNA epigenetically silences tran- scription by targeting Goa to chromatin. Science, 2008, 322:1717-1720.
  • 9Guo H, Ingolia NT, Weissman JS, Bartel DP. Mammalian microRNAs predominantly act to decrease target mRNA levels. Nature, 2010, 466:835-840.
  • 10Heo JB, Sung S. Vernalization-mediated epigenetic silencing by a long intronic noncoding RNA. Science, 2011, 331:76-79.

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